Details for: MYCBP2

Gene ID: 23077

Gene Type:  Protein-coding  - A gene that serves as a template for producing a messenger RNA (mRNA) molecule, which is then translated into a functional protein.

Symbol: MYCBP2

Ensembl ID: ENSG00000005810

Description: MYC binding protein 2

Cell Significance Landscape

Associated with

Significant Cells

Cell Significance Index (CSI) scores for the chosen context(s)

  • adipocyte CL0000136
    CSI 95.97
    rCSI 100%
    PRS 14.07
  • VIP GABAergic cortical interneuron CL4023016
    CSI 89.24
    rCSI 100%
    PRS 8.21
  • pvalb GABAergic cortical interneuron CL4023018
    CSI 87.82
    rCSI 100%
    PRS 7.81
  • sst GABAergic cortical interneuron CL4023017
    CSI 85.16
    rCSI 100%
    PRS 8.81
  • sncg GABAergic cortical interneuron CL4023015
    CSI 62.33
    rCSI 100%
    PRS 9.19
  • caudal ganglionic eminence derived cortical interneuron CL4023064
    CSI 59.6
    rCSI 100%
    PRS 8.34
  • lamp5 GABAergic cortical interneuron CL4023011
    CSI 58.84
    rCSI 98.77%
    PRS 8.4
  • differentiation-committed oligodendrocyte precursor CL4023059
    CSI 53.93
    rCSI 97.99%
    PRS 11.61
  • ependymal cell CL0000065
    CSI 53.7
    rCSI 100%
    PRS 6.31
  • L2/3 intratelencephalic projecting glutamatergic neuron CL4030059
    CSI 46.42
    rCSI 100%
    PRS 8.26
  • cerebellar granule cell CL0001031
    CSI 42.93
    rCSI 63.11%
    PRS 13.07
  • L4 intratelencephalic projecting glutamatergic neuron CL4030063
    CSI 42.49
    rCSI 100%
    PRS 8.1
  • neuron CL0000540
    CSI 40.83
    rCSI 100%
    PRS 11.33
  • retinal ganglion cell CL0000740
    CSI 40.41
    rCSI 89.28%
    PRS 10.22
  • glycinergic amacrine cell CL4030028
    CSI 38.91
    rCSI 100%
    PRS 13.95
  • inhibitory interneuron CL0000498
    CSI 38.74
    rCSI 89.43%
    PRS 11.46
  • L2/3-6 intratelencephalic projecting glutamatergic neuron CL4023040
    CSI 36.67
    rCSI 89.13%
    PRS 8.17
  • epicardial adipocyte CL1000309
    CSI 36.13
    rCSI 100%
    PRS 17.18
  • oligodendrocyte precursor cell CL0002453
    CSI 34.57
    rCSI 76.08%
    PRS 8.45
  • chandelier pvalb GABAergic cortical interneuron CL4023036
    CSI 32.49
    rCSI 100%
    PRS 9.6
  • L6b glutamatergic cortical neuron CL4023038
    CSI 30.48
    rCSI 95.25%
    PRS 8.95
  • L5/6 near-projecting glutamatergic neuron CL4030067
    CSI 30.43
    rCSI 100%
    PRS 7.69
  • amacrine cell CL0000561
    CSI 30.18
    rCSI 87.45%
    PRS 11.04
  • conjunctival epithelial cell CL1000432
    CSI 29.5
    rCSI 45.06%
    PRS 14.24
  • interneuron CL0000099
    CSI 28.23
    rCSI 56.67%
    PRS 10.55
  • GABAergic amacrine cell CL4030027
    CSI 27.85
    rCSI 95.38%
    PRS 12.46
  • central nervous system macrophage CL0000878
    CSI 26.68
    rCSI 88.42%
    PRS 13.24
  • L5 extratelencephalic projecting glutamatergic cortical neuron CL4023041
    CSI 26.37
    rCSI 94.9%
    PRS 7.82
  • fraction A pre-pro B cell CL0002045
    CSI 25.9
    rCSI 29.64%
    PRS 29.11
  • glutamatergic neuron CL0000679
    CSI 25.54
    rCSI 52.48%
    PRS 14.29
  • near-projecting glutamatergic cortical neuron CL4023012
    CSI 23.91
    rCSI 90.37%
    PRS 8.57
  • H1 horizontal cell CL0004217
    CSI 21.37
    rCSI 84.65%
    PRS 19.82
  • corneal epithelial cell CL0000575
    CSI 20.45
    rCSI 58.51%
    PRS 25.17
  • H2 horizontal cell CL0004218
    CSI 18.93
    rCSI 94.11%
    PRS 15.22
  • vascular leptomeningeal cell CL4023051
    CSI 17.67
    rCSI 30.98%
    PRS 10.51
  • CD14-low, CD16-positive monocyte CL0002396
    CSI 16.17
    rCSI 12.46%
    PRS 12.95
  • stromal cell of ovary CL0002132
    CSI 15.9
    rCSI 43.69%
    PRS 23.48
  • GABAergic neuron CL0000617
    CSI 15.89
    rCSI 53.24%
    PRS 9.78
  • microcirculation associated smooth muscle cell CL0008035
    CSI 15.69
    rCSI 45.41%
    PRS 16.14
  • corticothalamic-projecting glutamatergic cortical neuron CL4023013
    CSI 15.64
    rCSI 92.08%
    PRS 8.79
  • rod bipolar cell CL0000751
    CSI 15.28
    rCSI 27.46%
    PRS 11.89
  • intermediate monocyte CL0002393
    CSI 15.07
    rCSI 22.74%
    PRS 14.09
  • diffuse bipolar 3a cell CL4033029
    CSI 13.69
    rCSI 93.16%
    PRS 14.07
  • diffuse bipolar 6 cell CL4033032
    CSI 13.43
    rCSI 70.61%
    PRS 16.16
  • renal alpha-intercalated cell CL0005011
    CSI 13.35
    rCSI 17.85%
    PRS 18.83
  • retina horizontal cell CL0000745
    CSI 13.32
    rCSI 20.31%
    PRS 13.26
  • central nervous system neuron CL2000029
    CSI 13.27
    rCSI 97.57%
    PRS 7.54
  • subcutaneous adipocyte CL0002521
    CSI 13.16
    rCSI 67.39%
    PRS 12.14
  • myeloid dendritic cell CL0000782
    CSI 12.9
    rCSI 18.68%
    PRS 21.01
  • cerebral cortex endothelial cell CL1001602
    CSI 12.59
    rCSI 21.78%
    PRS 10.83
  • keratocyte CL0002363
    CSI 12.48
    rCSI 30%
    PRS 21.32
  • invaginating midget bipolar cell CL4033034
    CSI 11.7
    rCSI 69.1%
    PRS 14.75
  • midbrain dopaminergic neuron CL2000097
    CSI 11.55
    rCSI 74.01%
    PRS 21.15
  • OFFx cell CL4033036
    CSI 11.49
    rCSI 54.06%
    PRS 14.07
  • medium spiny neuron CL1001474
    CSI 11.37
    rCSI 97.95%
    PRS 5.19
  • mature B cell CL0000785
    CSI 11.3
    rCSI 9.83%
    PRS 17.59
  • flat midget bipolar cell CL4033033
    CSI 11.28
    rCSI 80.62%
    PRS 13.72
  • centrilobular region hepatocyte CL0019029
    CSI 11.2
    rCSI 29.22%
    PRS 22.34
  • renal interstitial pericyte CL1001318
    CSI 11.16
    rCSI 30.77%
    PRS 13.26
  • megakaryocyte-erythroid progenitor cell CL0000050
    CSI 11.05
    rCSI 9.98%
    PRS 12.63
  • diffuse bipolar 1 cell CL4033027
    CSI 10.29
    rCSI 77.32%
    PRS 12.79
  • tissue-resident macrophage CL0000864
    CSI 10.1
    rCSI 47.29%
    PRS 28.96
  • Bergmann glial cell CL0000644
    CSI 9.96
    rCSI 13.62%
    PRS 14.31
  • microglial cell CL0000129
    CSI 9.88
    rCSI 39.75%
    PRS 33.08
  • fibroblast of cardiac tissue CL0002548
    CSI 9.5
    rCSI 45.52%
    PRS 9.77
  • diffuse bipolar 2 cell CL4033028
    CSI 9.41
    rCSI 72.93%
    PRS 14.19
  • starburst amacrine cell CL0004232
    CSI 8.91
    rCSI 74.99%
    PRS 14.11
  • Hofbauer cell CL3000001
    CSI 8.48
    rCSI 16.01%
    PRS 17.69
  • retinal bipolar neuron CL0000748
    CSI 8.39
    rCSI 15.71%
    PRS 10.33
  • keratinocyte CL0000312
    CSI 8.11
    rCSI 6.8%
    PRS 17.02
  • diffuse bipolar 3b cell CL4033030
    CSI 8.07
    rCSI 53.55%
    PRS 14.35
  • brush cell of tracheobronchial tree CL0002075
    CSI 7.99
    rCSI 23.72%
    PRS 20.56
  • transit amplifying cell CL0009010
    CSI 7.94
    rCSI 12.15%
    PRS 23.09
  • retinal blood vessel endothelial cell CL0002585
    CSI 7.64
    rCSI 12.2%
    PRS 15.58
  • endothelial cell of pericentral hepatic sinusoid CL0019022
    CSI 7.61
    rCSI 23.45%
    PRS 21.53
  • renal principal cell CL0005009
    CSI 7.36
    rCSI 19.11%
    PRS 18.71
  • hematopoietic stem cell CL0000037
    CSI 7.3
    rCSI 4.85%
    PRS 17.02
  • S cone cell CL0003050
    CSI 7.08
    rCSI 31.12%
    PRS 10.92
  • unswitched memory B cell CL0000970
    CSI 6.94
    rCSI 5.84%
    PRS 22.86
  • double negative thymocyte CL0002489
    CSI 6.92
    rCSI 4.81%
    PRS 16.7
  • ON parasol ganglion cell CL4033052
    CSI 6.57
    rCSI 93.22%
    PRS 10.14
  • endothelial cell of placenta CL0009092
    CSI 6.38
    rCSI 31.45%
    PRS 19.3
  • macroglial cell CL0000126
    CSI 6.33
    rCSI 16.26%
    PRS 19.58
  • renal beta-intercalated cell CL0002201
    CSI 6.3
    rCSI 15.03%
    PRS 16.9
  • myeloid cell CL0000763
    CSI 6.24
    rCSI 25.71%
    PRS 42.96
  • GABAergic interneuron CL0011005
    CSI 6.15
    rCSI 96.91%
    PRS 8.45
  • cerebral cortex pyramidal neuron CL4023111
    CSI 6.09
    rCSI 37.52%
    PRS 37.32
  • naive thymus-derived CD4-positive, alpha-beta T cell CL0000895
    CSI 5.79
    rCSI 7.27%
    PRS 57.5
  • astrocyte of the cerebral cortex CL0002605
    CSI 5.74
    rCSI 12.87%
    PRS 8.76
  • naive B cell CL0000788
    CSI 5.7
    rCSI 4.89%
    PRS 24.52
  • common myeloid progenitor CL0000049
    CSI 5.51
    rCSI 4.45%
    PRS 14.09
  • diffuse bipolar 4 cell CL4033031
    CSI 5.45
    rCSI 62.41%
    PRS 14.63
  • periportal region hepatocyte CL0019026
    CSI 5.33
    rCSI 20.72%
    PRS 19.74
  • kidney loop of Henle thin ascending limb epithelial cell CL1001107
    CSI 5.21
    rCSI 13.47%
    PRS 13.28
  • cerebral cortex GABAergic interneuron CL0010011
    CSI 5.21
    rCSI 15.37%
    PRS 17.31
  • mature T cell CL0002419
    CSI 5.13
    rCSI 3.99%
    PRS 20.49
  • epithelial cell of proximal tubule CL0002306
    CSI 5.07
    rCSI 12.39%
    PRS 14.12
  • deuterosomal cell CL4033044
    CSI 5.06
    rCSI 17.11%
    PRS 23.45
  • CD14-positive, CD16-negative classical monocyte CL0002057
    CSI 5.01
    rCSI 30.29%
    PRS 31.51
  • parietal epithelial cell CL1000452
    CSI 4.95
    rCSI 13.24%
    PRS 11.94
  • duct epithelial cell CL0000068
    CSI -10.4
    rCSI -15.2%
    PRS 15.0%
  • mesenchymal cell CL0008019
    CSI -3.8
    rCSI -9.7%
    PRS 14.4%
  • CD8-positive, alpha-beta thymocyte CL0000811
    CSI -3.4
    rCSI -5.4%
    PRS 33.9%
  • glioblast CL0000030
    CSI -3.3
    rCSI -5.3%
    PRS 12.3%
  • T-helper 1 cell CL0000545
    CSI -2.9
    rCSI -5.2%
    PRS 36.8%
  • smooth muscle cell of the pulmonary artery CL0002591
    CSI -2.8
    rCSI -21.1%
    PRS 47.3%
  • activated CD8-positive, alpha-beta T cell, human CL0001049
    CSI -2.7
    rCSI -4.6%
    PRS 28.2%
  • platelet CL0000233
    CSI -2.3
    rCSI -9.5%
    PRS 28.5%
  • basal cell of prostate epithelium CL0002341
    CSI -2.2
    rCSI -6.3%
    PRS 31.3%
  • CD4-positive, CD25-positive, alpha-beta regulatory T cell CL0000792
    CSI -1.9
    rCSI -1.9%
    PRS 22.3%
  • radial glial cell CL0000681
    CSI -1.8
    rCSI -2.5%
    PRS 14.7%
  • lung macrophage CL1001603
    CSI -1.7
    rCSI -3.7%
    PRS 16.2%
  • ciliated columnar cell of tracheobronchial tree CL0002145
    CSI -1.6
    rCSI -3.6%
    PRS 14.8%
  • enteroendocrine cell of small intestine CL0009006
    CSI -1.2
    rCSI -2.7%
    PRS 21.7%
  • elicited macrophage CL0000861
    CSI -1.1
    rCSI -1.0%
    PRS 16.4%
  • enteroendocrine cell CL0000164
    CSI -0.7
    rCSI -1.0%
    PRS 15.8%
  • enteroglial cell CL4040002
    CSI -0.7
    rCSI -3.4%
    PRS 25.3%
  • late pro-B cell CL0002048
    CSI -0.5
    rCSI -1.3%
    PRS 40.3%
  • luminal cell of prostate epithelium CL0002340
    CSI -0.5
    rCSI -2.5%
    PRS 25.5%
  • exhausted T cell CL0011025
    CSI -0.3
    rCSI -5.2%
    PRS 51.7%
  • pancreatic epsilon cell CL0005019
    CSI -0.1
    rCSI -0.5%
    PRS 33.2%
  • B-2 B cell CL0000822
    CSI 0.1
    rCSI 1.2%
    PRS 64.6%
  • activated CD4-positive, alpha-beta T cell, human CL0001043
    CSI 0.1
    rCSI 0.1%
    PRS 65.6%
  • hair follicular keratinocyte CL2000092
    CSI 0.1
    rCSI 1.5%
    PRS 53.2%
  • pre-conventional dendritic cell CL0002010
    CSI 0.1
    rCSI 1.2%
    PRS 44.5%
  • metallothionein-positive alveolar macrophage CL4033042
    CSI 0.1
    rCSI 1.0%
    PRS 51.7%
  • mesenchymal stem cell CL0000134
    CSI 0.1
    rCSI 1.0%
    PRS 25.6%
  • P/D1 enteroendocrine cell CL0002268
    CSI 0.1
    rCSI 0.6%
    PRS 34.7%
  • small pre-B-II cell CL0000954
    CSI 0.1
    rCSI 0.1%
    PRS 29.3%
  • erythroid progenitor cell CL0000038
    CSI 0.1
    rCSI 0.7%
    PRS 21.8%
  • myelocyte CL0002193
    CSI 0.1
    rCSI 0.8%
    PRS 44.2%
  • pancreatic stellate cell CL0002410
    CSI 0.1
    rCSI 0.8%
    PRS 21.4%
  • effector memory CD8-positive, alpha-beta T cell, terminally differentiated CL0001062
    CSI 0.2
    rCSI 0.8%
    PRS 18.6%
  • foveolar cell of stomach CL0002179
    CSI 0.2
    rCSI 0.3%
    PRS 22.9%
  • group 2 innate lymphoid cell CL0001069
    CSI 0.2
    rCSI 0.8%
    PRS 46.5%
  • regular ventricular cardiac myocyte CL0002131
    CSI 0.2
    rCSI 1.0%
    PRS 11.2%
  • luminal epithelial cell of mammary gland CL0002326
    CSI 0.2
    rCSI 0.3%
    PRS 21.8%
  • enterocyte of epithelium of small intestine CL1000334
    CSI 0.2
    rCSI 3.2%
    PRS 34.9%
  • basal cell of epithelium of trachea CL1000348
    CSI 0.2
    rCSI 1.5%
    PRS 42.5%
  • bronchial goblet cell CL1000312
    CSI 0.2
    rCSI 0.9%
    PRS 30.7%
  • neuroblast (sensu Nematoda and Protostomia) CL0000338
    CSI 0.2
    rCSI 0.3%
    PRS 12.5%
  • acinar cell CL0000622
    CSI 0.2
    rCSI 0.3%
    PRS 18.7%
  • B-1 B cell CL0000819
    CSI 0.2
    rCSI 6.2%
    PRS 60.6%
  • kidney distal convoluted tubule epithelial cell CL1000849
    CSI 0.2
    rCSI 2.6%
    PRS 19.5%
  • helper T cell CL0000912
    CSI 0.3
    rCSI 0.4%
    PRS 19.7%
  • mesodermal cell CL0000222
    CSI 0.3
    rCSI 0.4%
    PRS 14.1%
  • endothelial cell of arteriole CL1000412
    CSI 0.3
    rCSI 1.7%
    PRS 40.0%
  • tracheal goblet cell CL1000329
    CSI 0.3
    rCSI 0.7%
    PRS 28.4%
  • eosinophil CL0000771
    CSI 0.3
    rCSI 2.1%
    PRS 36.4%
  • enterocyte of epithelium of large intestine CL0002071
    CSI 0.3
    rCSI 1.7%
    PRS 24.9%
  • pancreatic A cell CL0000171
    CSI 0.3
    rCSI 0.3%
    PRS 15.2%
  • skeletal muscle satellite stem cell CL0008011
    CSI 0.3
    rCSI 1.5%
    PRS 38.6%
  • eye photoreceptor cell CL0000287
    CSI 0.3
    rCSI 3.7%
    PRS 35.1%
  • forebrain radial glial cell CL0013000
    CSI 0.3
    rCSI 1.1%
    PRS 20.7%
  • respiratory epithelial cell CL0002368
    CSI 0.3
    rCSI 2.1%
    PRS 44.9%
  • small intestine goblet cell CL1000495
    CSI 0.4
    rCSI 0.8%
    PRS 19.0%
  • mucous neck cell CL0000651
    CSI 0.4
    rCSI 0.5%
    PRS 22.8%
  • lung ciliated cell CL1000271
    CSI 0.4
    rCSI 0.4%
    PRS 10.4%
  • contractile cell CL0000183
    CSI 0.4
    rCSI 1.1%
    PRS 11.7%
  • tracheobronchial serous cell CL0019001
    CSI 0.4
    rCSI 1.6%
    PRS 26.9%
  • multi-ciliated epithelial cell CL0005012
    CSI 0.4
    rCSI 0.4%
    PRS 12.2%
  • cytotoxic T cell CL0000910
    CSI 0.4
    rCSI 2.3%
    PRS 20.7%
  • CD34-positive, CD56-positive, CD117-positive common innate lymphoid precursor, human CL0001074
    CSI 0.4
    rCSI 4.9%
    PRS 51.9%
  • epithelial cell CL0000066
    CSI 0.5
    rCSI 0.7%
    PRS 20.1%
  • collagen secreting cell CL0000667
    CSI 0.5
    rCSI 2.6%
    PRS 47.7%
  • cerebellar neuron CL1001611
    CSI 0.5
    rCSI 4.1%
    PRS 6.6%
  • vasa recta ascending limb cell CL1001131
    CSI 0.5
    rCSI 2.1%
    PRS 48.6%
  • mature microglial cell CL0002629
    CSI 0.5
    rCSI 2.0%
    PRS 19.3%
  • colon goblet cell CL0009039
    CSI 0.5
    rCSI 1.2%
    PRS 21.4%
  • lung pericyte CL0009089
    CSI 0.5
    rCSI 1.3%
    PRS 17.0%
  • respiratory suprabasal cell CL4033048
    CSI 0.5
    rCSI 0.7%
    PRS 16.4%
  • central memory CD8-positive, alpha-beta T cell CL0000907
    CSI 0.5
    rCSI 0.4%
    PRS 17.1%
  • erythroblast CL0000765
    CSI 0.5
    rCSI 1.4%
    PRS 23.2%
  • retinal rod cell CL0000604
    CSI 0.5
    rCSI 0.9%
    PRS 14.0%
  • glandular epithelial cell CL0000150
    CSI 0.6
    rCSI 1.5%
    PRS 27.7%
  • pancreatic acinar cell CL0002064
    CSI 0.6
    rCSI 0.7%
    PRS 15.6%
  • cardiac muscle cell CL0000746
    CSI 0.6
    rCSI 0.8%
    PRS 11.0%
  • glial cell CL0000125
    CSI 0.6
    rCSI 2.2%
    PRS 14.3%
  • endothelial cell of uterus CL0009095
    CSI 0.6
    rCSI 4.3%
    PRS 38.2%
  • ionocyte CL0005006
    CSI 0.6
    rCSI 0.7%
    PRS 13.1%
  • tracheobronchial smooth muscle cell CL0019019
    CSI 0.6
    rCSI 1.1%
    PRS 18.8%
  • alveolar macrophage CL0000583
    CSI 0.6
    rCSI 1.1%
    PRS 16.6%
  • enteric neuron CL0007011
    CSI 0.6
    rCSI 9.4%
    PRS 35.1%
  • lung secretory cell CL1000272
    CSI 0.7
    rCSI 1.6%
    PRS 13.1%
  • alternatively activated macrophage CL0000890
    CSI 0.7
    rCSI 0.8%
    PRS 21.7%
  • effector memory CD4-positive, alpha-beta T cell CL0000905
    CSI 0.7
    rCSI 0.9%
    PRS 33.8%
  • cholangiocyte CL1000488
    CSI 0.7
    rCSI 4.1%
    PRS 22.4%
  • type B pancreatic cell CL0000169
    CSI 0.7
    rCSI 1.5%
    PRS 13.3%
  • CD14-positive, CD16-positive monocyte CL0002397
    CSI 0.7
    rCSI 0.9%
    PRS 20.0%
  • BEST4+ enteroycte CL4030026
    CSI 0.7
    rCSI 0.9%
    PRS 15.0%
  • prostate gland microvascular endothelial cell CL2000059
    CSI 0.7
    rCSI 16.6%
    PRS 46.3%
  • lung interstitial macrophage CL4033043
    CSI 0.7
    rCSI 1.6%
    PRS 29.2%
  • podocyte CL0000653
    CSI 0.7
    rCSI 3.1%
    PRS 14.0%
  • erythroid lineage cell CL0000764
    CSI 0.7
    rCSI 4.5%
    PRS 32.7%
  • effector CD4-positive, alpha-beta T cell CL0001044
    CSI 0.7
    rCSI 2.0%
    PRS 20.7%
  • neural progenitor cell CL0011020
    CSI 0.7
    rCSI 3.1%
    PRS 13.7%
  • large pre-B-II cell CL0000957
    CSI 0.7
    rCSI 2.0%
    PRS 24.4%
  • megakaryocyte CL0000556
    CSI 0.7
    rCSI 3.1%
    PRS 25.4%
  • dendritic cell, human CL0001056
    CSI 0.7
    rCSI 1.1%
    PRS 16.7%
  • mesangial cell CL0000650
    CSI 0.7
    rCSI 3.0%
    PRS 19.0%

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Network Configuration

Explore relationships of the current gene. Select an Interaction Source: 'ONTOLOGY' for shared pathways (GO/Reactome) or 'STRING' for protein-protein interactions. Further refine by selecting context genes and comparing Cell Significance Index (CSI) scores between baseline and target cell types and their specific contexts.

Comma-separated if multiple.
Comma-separated if multiple.

Legend:
  • Query Gene
  • Node Color (Target Cell CSI, relative to current network):
    • Very High
    • High
    • Medium
    • Low
    • Very Low
    • CSI N/A
  • Node Size: Proportional to Target Cell CSI magnitude
  • STRING PPI Edge
  • Shared Pathway Edge (ONTOLOGY)

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Other Information

This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.

## Summary [MYCBP2](/details-gene/23077) (MYC binding protein 2) is a protein-coding gene located on chromosome 13q22.3. It encodes a large, multi-domain protein initially identified for its interaction with the MYC proto-oncogene product [[Link](https://doi.org/10.1073/pnas.95.16.9172)]. Functionally, [MYCBP2](/details-gene/23077) is recognized as an E3 ubiquitin ligase that plays a crucial role in protein ubiquitination and degradation pathways [[Link](https://doi.org/10.1016/j.cellsig.2008.01.020)]. **Overall** expression data reveal its highest significance in [adipocytes](/details-cell/CL0000136) and a wide array of neuronal cell types, particularly GABAergic cortical interneurons. Its annotated functions in axon guidance and the regulation of synaptic assembly are consistent with a specialized role in the development and maintenance of the central nervous system. ## Cellular Roles and Expression Landscape The expression profile of [MYCBP2](/details-gene/23077) indicates a highly specialized function, primarily within the central nervous system and adipose tissue. **Overall**, the gene shows its most significant expression in [adipocytes](/details-cell/CL0000136) (CSI: 95.97), suggesting a potentially important role in metabolic regulation or adipogenesis. Following adipocytes, its expression is exceptionally high across diverse neuronal subtypes. It is a prominent marker for multiple GABAergic cortical interneurons, including [VIP GABAergic cortical interneuron](/details-cell/CL4023016) (CSI: 89.24), [pvalb GABAergic cortical interneuron](/details-cell/CL4023018) (CSI: 87.82), and [sst GABAergic cortical interneuron](/details-cell/CL4023017) (CSI: 85.16). Its significance extends to other neural cells such as [differentiation-committed oligodendrocyte precursor](/details-cell/CL4023059) (CSI: 53.93) and [ependymal cells](/details-cell/CL0000065) (CSI: 53.70), highlighting a broad involvement in both neuronal and glial cell biology. Conversely, [MYCBP2](/details-gene/23077) expression is minimal or absent in a variety of other lineages. It is a notable anti-marker for immune cells, including [CD8-positive, alpha-beta thymocytes](/details-cell/CL0000811) (CSI: -3.44) and [T-helper 1 cells](/details-cell/CL0000545) (CSI: -2.85). Furthermore, its low significance in [mesenchymal cells](/details-cell/CL0008019) (CSI: -3.82) and various epithelial cells like [duct epithelial cell](/details-cell/CL0000068) (CSI: -10.39) underscores its specific role outside of hematopoietic and structural tissues. ## Pathways and Molecular Function The functional annotations for [MYCBP2](/details-gene/23077) are highly consistent with its observed expression pattern in the nervous system. As a molecule, it exhibits key activities including *ubiquitin protein ligase activity* ([GO:0061630](https://www.ebi.ac.uk/QuickGO/term/GO:0061630)), *guanyl-nucleotide exchange factor activity* ([GO:0005085](https://www.ebi.ac.uk/QuickGO/term/GO:0005085)), and *small gtpase binding* ([GO:0031267](https://www.ebi.ac.uk/QuickGO/term/GO:0031267)). Research has confirmed its function as an E3 ubiquitin ligase, particularly in the context of TSC/mTOR signaling regulation [[Link](https://doi.org/10.1016/j.cellsig.2008.01.020)]. At the biological process level, [MYCBP2](/details-gene/23077) is strongly implicated in neurodevelopment. It is involved in *axon guidance* ([GO:0007411](https://www.ebi.ac.uk/QuickGO/term/GO:0007411)), *central nervous system projection neuron axonogenesis* ([GO:0021952](https://www.ebi.ac.uk/QuickGO/term/GO:0021952)), and the *regulation of synaptic assembly at neuromuscular junction* ([GO:0008582](https://www.ebi.ac.uk/QuickGO/term/GO:0008582)). These roles in establishing and maintaining neuronal connectivity align perfectly with its high significance in diverse neuron populations. Its broader role in *positive regulation of protein ubiquitination* ([GO:0031398](https://www.ebi.ac.uk/QuickGO/term/GO:0031398)) likely represents the core biochemical mechanism through which it executes these specialized functions. ## Research Directions The unique expression pattern and established molecular functions of [MYCBP2](/details-gene/23077) suggest several avenues for future research, particularly concerning its roles in metabolic and neurological homeostasis. Based on the available data, the following hypotheses can be proposed: 1. Given its top-ranking significance in [adipocytes](/details-cell/CL0000136) and its established role as a negative regulator of the TSC complex [[Link](https://doi.org/10.1074/jbc.m310208200)], [MYCBP2](/details-gene/23077) likely functions as a critical modulator of adipogenesis and lipid metabolism through the mTOR signaling pathway. Dysregulation of [MYCBP2](/details-gene/23077) in these cells may contribute to metabolic disorders. 2. The high significance of [MYCBP2](/details-gene/23077) across multiple subtypes of cortical interneurons, combined with its annotated role in axon guidance, suggests that it is essential for the precise wiring of inhibitory circuits in the brain. Its disruption could lead to neurodevelopmental disorders characterized by an excitatory/inhibitory imbalance. To test the first hypothesis regarding its role in adipocytes, a compelling experimental approach would be to use CRISPR-Cas9 to knock down or knock out [MYCBP2](/details-gene/23077) in a human pre-adipocyte cell line. Following induced differentiation, the impact on lipid accumulation could be quantified via Oil Red O staining, and changes in the expression of key adipogenic markers (e.g., PPARG, FABP4) could be measured by RT-qPCR and western blotting. Furthermore, phosphoproteomic analysis could be employed to directly assess downstream mTORC1 signaling activity by measuring the phosphorylation status of targets like S6K1 and 4E-BP1. From a therapeutic standpoint, [MYCBP2](/details-gene/23077) presents an intriguing target. As an E3 ubiquitin ligase, it is amenable to targeting by small molecule inhibitors or proteolysis-targeting chimeras (PROTACs). If its activity is aberrantly increased in certain neurological diseases (e.g., those involving synaptic pruning defects) or in metabolic conditions like obesity, **inhibition** of its ligase activity could be a viable therapeutic strategy. Its relatively restricted expression outside the CNS and adipose tissue might offer a favorable therapeutic window with limited off-target effects.

Genular Protein ID: 3712659903

Symbol: MYCB2_HUMAN

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 9689053

Title: Identification of a large Myc-binding protein that contains RCC1-like repeats.

PubMed ID: 9689053

DOI: 10.1073/pnas.95.16.9172

PubMed ID: 15057823

Title: The DNA sequence and analysis of human chromosome 13.

PubMed ID: 15057823

DOI: 10.1038/nature02379

PubMed ID: 10048485

Title: Prediction of the coding sequences of unidentified human genes. XII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro.

PubMed ID: 10048485

DOI: 10.1093/dnares/5.6.355

PubMed ID: 12168954

Title: Construction of expression-ready cDNA clones for KIAA genes: manual curation of 330 KIAA cDNA clones.

PubMed ID: 12168954

DOI: 10.1093/dnares/9.3.99

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 11042152

Title: Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells.

PubMed ID: 11042152

DOI: 10.1101/gr.140200

PubMed ID: 14559897

Title: Pam and its ortholog highwire interact with and may negatively regulate the TSC1.TSC2 complex.

PubMed ID: 14559897

DOI: 10.1074/jbc.m310208200

PubMed ID: 17081983

Title: Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.

PubMed ID: 17081983

DOI: 10.1016/j.cell.2006.09.026

PubMed ID: 18308511

Title: Pam (Protein associated with Myc) functions as an E3 ubiquitin ligase and regulates TSC/mTOR signaling.

PubMed ID: 18308511

DOI: 10.1016/j.cellsig.2008.01.020

PubMed ID: 18691976

Title: Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle.

PubMed ID: 18691976

DOI: 10.1016/j.molcel.2008.07.007

PubMed ID: 18669648

Title: A quantitative atlas of mitotic phosphorylation.

PubMed ID: 18669648

DOI: 10.1073/pnas.0805139105

PubMed ID: 19413330

Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.

PubMed ID: 19413330

DOI: 10.1021/ac9004309

PubMed ID: 19398581

Title: Fbxo45 forms a novel ubiquitin ligase complex and is required for neuronal development.

PubMed ID: 19398581

DOI: 10.1128/mcb.00364-09

PubMed ID: 19369195

Title: Large-scale proteomics analysis of the human kinome.

PubMed ID: 19369195

DOI: 10.1074/mcp.m800588-mcp200

PubMed ID: 19690332

Title: Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.

PubMed ID: 19690332

DOI: 10.1126/scisignal.2000007

PubMed ID: 20534529

Title: E3 ligases Arf-bp1 and Pam mediate lithium-stimulated degradation of the circadian heme receptor Rev-erb alpha.

PubMed ID: 20534529

DOI: 10.1073/pnas.1000438107

PubMed ID: 20068231

Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.

PubMed ID: 20068231

DOI: 10.1126/scisignal.2000475

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 21406692

Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.

PubMed ID: 21406692

DOI: 10.1126/scisignal.2001570

PubMed ID: 22357847

Title: RAE-1, a novel PHR binding protein, is required for axon termination and synapse formation in Caenorhabditis elegans.

PubMed ID: 22357847

DOI: 10.1523/jneurosci.2901-11.2012

PubMed ID: 23186163

Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.

PubMed ID: 23186163

DOI: 10.1021/pr300630k

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

PubMed ID: 26304119

Title: MYCBP2 is a guanosine exchange factor for Ran protein and determines its localization in neurons of dorsal root ganglia.

PubMed ID: 26304119

DOI: 10.1074/jbc.m115.646901

PubMed ID: 27278822

Title: The Parkinson's disease-associated genes ATP13A2 and SYT11 regulate autophagy via a common pathway.

PubMed ID: 27278822

DOI: 10.1038/ncomms11803

PubMed ID: 29293652

Title: USP11 deubiquitinates RAE1 and plays a key role in bipolar spindle formation.

PubMed ID: 29293652

DOI: 10.1371/journal.pone.0190513

PubMed ID: 29643511

Title: Activity-based E3 ligase profiling uncovers an E3 ligase with esterification activity.

PubMed ID: 29643511

DOI: 10.1038/s41586-018-0026-1

Sequence Information:

  • Length: 4678
  • Mass: 513636
  • Checksum: F76B95A12613E74B
  • Sequence:
  • MMMCAATASP AAASSGLGGD GFYPAATFSS SPAPGALFMP VPDGSVAAAG LGLGLPAADS 
    RGHYQLLLSG RALADRYRRI YTAALNDRDQ GGGSAGHPAS RNKKILNKKK LKRKQKSKSK 
    VKTRSKSENL ENTVIIPDIK LHSNPSAFNI YCNVRHCVLE WQKKEISLAA ASKNSVQSGE 
    SDSDEEEESK EPPIKLPKII EVGLCEVFEL IKETRFSHPS LCLRSLQALL NVLQGQQPEG 
    LQSEPPEVLE SLFQLLLEIT VRSTGMNDST GQSLTALSCA CLFSLVASWG ETGRTLQAIS 
    AILTNNGSHA CQTIQVPTIL NSLQRSVQAV LVGKIQIQDW FSNGIKKAAL MHKWPLKEIS 
    VDEDDQCLLQ NDGFFLYLLC KDGLYKIGSG YSGTVRGHIY NSTSRIRNRK EKKSWLGYAQ 
    GYLLYRDVNN HSMTAIRISP ETLEQDGTVM LPDCHTEGQN ILFTDGEYIN QIAASRDDGF 
    VVRIFATSTE PVLQQELQLK LARKCLHACG ISLFDLEKDL HIISTGFDEE SAILGAGREF 
    ALMKTANGKI YYTGKYQSLG IKQGGPSAGK WVELPITKSP KIVHFSVGHD GSHALLVAED 
    GSIFFTGSAS KGEDGESTKS RRQSKPYKPK KIIKMEGKIV VYTACNNGSS SVISKDGELY 
    MFGKDAIYSD SSSLVTDLKG HFVTQVAMGK AHTCVLMKNG EVWTFGVNNK GQCGRDTGAM 
    NQGGKGFGVE NMATAMDEDL EEELDEKDEK SMMCPPGMHK WKLEQCMVCT VCGDCTGYGA 
    SCVSSGRPDR VPGGICGCGS GESGCAVCGC CKACARELDG QEARQRGILD AVKEMIPLDL 
    LLAVPVPGVN IEEHLQLRQE EKRQRVIRRH RLEEGRGPLV FAGPIFMNHR EQALARLRSH 
    PAQLKHKRDK HKDGSGERGE KDASKITTYP PGSVRFDCEL RAVQVSCGFH HSVVLMENGD 
    VYTFGYGQHG QLGHGDVNSR GCPTLVQALP GPSTQVTAGS NHTAVLLMDG QVFTFGSFSK 
    GQLGRPILDV PYWNAKPAPM PNIGSKYGRK ATWIGASGDQ TFLRIDEALI NSHVLATSEI 
    FASKHIIGLV PASISEPPPF KCLLINKVDG SCKTFNDSEQ EDLQGFGVCL DPVYDVIWRF 
    RPNTRELWCY NAVVADARLP SAADMQSRCS ILSPELALPT GSRALTTRSH AALHILGCLD 
    TLAAMQDLKM GVASTEEETQ AVMKVYSKED YSVVNRFESH GGGWGYSAHS VEAIRFSADT 
    DILLGGLGLF GGRGEYTAKI KLFELGPDGG DHETDGDLLA ETDVLAYDCA AREKYAMMFD 
    EPVLLQAGWW YVAWARVSGP SSDCGSHGQA SITTDDGVVF QFKSSKKSNN GTDVNAGQIP 
    QLLYRLPTSD GSASKGKQQT SEPVHILKRS FARTVSVECF ESLLSILHWS WTTLVLGVEE 
    LRGLKGFQFT ATLLDLERLR FVGTCCLRLL RVYTCEIYPV SATGKAVVEE TSKLAECIGK 
    TRTLLRKILS EGVDHCMVKL DNDPQGYLSQ PLSLLEAVLQ ECHNTFTACF HSFYPTPALQ 
    WACLCDLLNC LDQDIQEANF KTSSSRLLAA VMSALCHTSV KLTSIFPIAY DGEVLLRSIV 
    KQVSTENDST LVHRFPLLVA HMEKLSQSEE NISGMTSFRE VLEKMLVIVV LPVRNSLRRE 
    NELFSSHLVS NTCGLLASIV SELTASALGS EVDGLNSLHS VKASANRFTK TSQGRSWNTG 
    NGSPDAICFS VDKPGIVVVG FSVYGGGGIH EYELEVLVDD SEHAGDSTHS HRWTSLELVK 
    GTYTTDDSPS DIAEIRLDKV VPLKENVKYA VRLRNYGSRT ANGDGGMTTV QCPDGVTFTF 
    STCSLSSNGT NQTRGQIPQI LYYRSEFDGD LQSQLLSKAN EEDKNCSRAL SVVSTVVRAS 
    KDLLHRALAV DADDIPELLS SSSLFSMLLP LIIAYIGPVA AAIPKVAVEV FGLVQQLLPS 
    VAILNQKYAP PAFNPNQSTD STTGNQPEQG LSACTTSSHY AVIESEHPYK PACVMHYKVT 
    FPECVRWMTI EFDPQCGTAQ SEDVLRLLIP VRTVQNSGYG PKLTSVHENL NSWIELKKFS 
    GSSGWPTMVL VLPGNEALFS LETASDYVKD DKASFYGFKC FAIGYEFSPG PDEGVIQLEK 
    ELANLGGVCA AALMKKDLAL PIGNELEEDL EILEEAALQV CKTHSGILGK GLALSHSPTI 
    LEALEGNLPL QIQSNEQSFL DDFIACVPGS SGGRLARWLQ PDSYADPQKT SLILNKDDIR 
    CGWPTTITVQ TKDQYGDVVH VPNMKVEVKA VPVSQKKMSL QQDQAKKPQR IPGSPAVTAA 
    SSNTDMTYGG LASPKLDVSY EPMIVKEARY IAITMMKVYE NYSFEELRFA SPTPKRPSEN 
    MLIRVNNDGT YCANWTPGAI GLYTLHVTID GIEIDAGLEV KVKDPPKGMI PPGTQLVKPK 
    SEPQPNKVRK FVAKDSAGLR IRSHPSLQSE QIGIVKVNGT ITFIDEIHND DGVWLRLNDE 
    TIKKYVPNMN GYTEAWCLSF NQHLGKSLLV PVDESKTNTD DFFKDINSCC PQEATMQEQD 
    MPFLRGGPGM YKVVKTGPSG HNIRSCPNLR GIPIGMLVLG NKVKAVGEVT NSEGTWVQLD 
    QNSMVEFCES DEGEAWSLAR DRGGNQYLRH EDEQALLDQN SQTPPPSPFS VQAFNKGASC 
    SAQGFDYGLG NSKGDRGNIS TSSKPASTSG KSELSSKHSR SLKPDGRMSR TTADQKKPRG 
    TESLSASESL ILKSDAAKLR SDSHSRSLSP NHNTLQTLKS DGRMPSSSRA ESPGPGSRLS 
    SPKPKTLPAN RSSPSGASSP RSSSPHDKNL PQKSTAPVKT KLDPPRERSK SDSYTLDPDT 
    LRKKKMPLTE PLRGRSTSPK PKSVPKDSTD SPGSENRAPS PHVVQENLHS EVVEVCTSST 
    LKTNSLTDST CDDSSEFKSV DEGSNKVHFS IGKAPLKDEQ EMRASPKISR KCANRHTRPK 
    KEKSSFLFKG DGSKPLEPAK QAMSPSVAEC ARAVFASFLW HEGIVHDAMA CSSFLKFHPE 
    LSKEHAPIRS SLNSQQPTEE KETKLKNRHS LEISSALNMF NIAPHGPDIS KMGSINKNKV 
    LSMLKEPPLH EKCEDGKTET TFEMSMHNTM KSKSPLPLTL QHLVAFWEDI SLATIKAASQ 
    NMIFPSPGSC AVLKKKECEK ENKKSKKEKK KKEKAEVRPR GNLFGEMAQL AVGGPEKDTI 
    CELCGESHPY PVTYHMRQAH PGCGRYAGGQ GYNSIGHFCG GWAGNCGDGG IGGSTWYLVC 
    DRCREKYLRE KQAAAREKVK QSRRKPMQVK TPRALPTMEA HQVIKANALF LLSLSSAAEP 
    SILCYHPAKP FQSQLPSVKE GISEDLPVKM PCLYLQTLAR HHHENFVGYQ DDNLFQDEMR 
    YLRSTSVPAP YISVTPDASP NVFEEPESNM KSMPPSLETS PITDTDLAKR TVFQRSYSVV 
    ASEYDKQHSI LPARVKAIPR RRVNSGDTEV GSSLLRHPSP ELSRLISAHS SLSKGERNFQ 
    WPVLAFVIQH HDLEGLEIAM KQALRKSACR VFAMEAFNWL LCNVIQTTSL HDILWHFVAS 
    LTPAPVEPEE EEDEENKTSK ENSEQEKDTR VCEHPLSDIV IAGEAAHPLP HTFHRLLQTI 
    SDLMMSLPSG SSLQQMALRC WSLKFKQSDH QFLHQSNVFH HINNILSKSD DGDSEESFSI 
    SIQSGFEAMS QELCIVMCLK DLTSIVDIKT SSRPAMIGSL TDGSTETFWE SGDEDKNKTK 
    NITINCVKGI NARYVSVHVD NSRDLGNKVT SMTFLTGKAV EDLCRIKQVD LDSRHIGWVT 
    SELPGGDNHI IKIELKGPEN TLRVRQVKVL GWKDGESTKI AGQISASVAQ QRNCEAETLR 
    VFRLITSQVF GKLISGDAEP TPEQEEKALL SSPEGEEKVY NATSDADLKE HMVGIIFSRS 
    KLTNLQKQVC AHIVQAIRME ATRVREEWEH AISSKENANS QPNDEDASSD AYCFELLSMV 
    LALSGSNVGR QYLAQQLTLL QDLFSLLHTA SPRVQRQVTS LLRRVLPEVT PSRLASIIGV 
    KSLPPADISD IIHSTEKGDW NKLGILDMFL GCIAKALTVQ LKAKGTTITG TAGTTVGKGV 
    TTVTLPMIFN SSYLRRGESH WWMKGSTPTQ ISEIIIKLIK DMAAGHLSEA WSRVTKNAIA 
    ETIIALTKME EEFRSPVRCI ATTRLWLALA SLCVLDQDHV DRLSSGRWMG KDGQQKQMPM 
    CDNHDDGETA AIILCNVCGN LCTDCDRFLH LHRRTKTHQR QVFKEEEEAI KVDLHEGCGR 
    TKLFWLMALA DSKTMKAMVE FREHTGKPTT SSSEACRFCG SRSGTELSAV GSVCSDADCQ 
    EYAKIACSKT HPCGHPCGGV KNEEHCLPCL HGCDKSATSL KQDADDMCMI CFTEALSAAP 
    AIQLDCSHIF HLQCCRRVLE NRWLGPRITF GFISCPICKN KINHIVLKDL LDPIKELYED 
    VRRKALMRLE YEGLHKSEAI TTPGVRFYND PAGYAMNRYA YYVCYKCRKA YFGGEARCDA 
    EAGRGDDYDP RELICGACSD VSRAQMCPKH GTDFLEYKCR YCCSVAVFFC FGTTHFCNAC 
    HDDFQRMTSI PKEELPHCPA GPKGKQLEGT ECPLHVVHPP TGEEFALGCG VCRNAHTF