Details for: TMEM161B DT

Gene ID: 100505894

Gene Type:  ncRNA (Non-coding RNA)  - A functional RNA molecule that is transcribed from DNA but not translated into a protein. Includes classes like miRNA and lncRNA.

Symbol: TMEM161B DT

Ensembl ID: ENSG00000247828

Description: TMEM161B divergent transcript

Selected Context(s):  Overall

Cell Significance Landscape

Contexts:

Significant Cells

Cell Significance Index (CSI) scores for the chosen context(s)

  • pvalb GABAergic cortical interneuron CL4023018
    CSI 53.36
    rCSI 66.38%
    PRS 64.81
  • VIP GABAergic cortical interneuron CL4023016
    CSI 51.47
    rCSI 61.48%
    PRS 66.93
  • sst GABAergic cortical interneuron CL4023017
    CSI 46.51
    rCSI 59.96%
    PRS 68.08
  • Bergmann glial cell CL0000644
    CSI 39.76
    rCSI 54.41%
    PRS 75.15
  • sncg GABAergic cortical interneuron CL4023015
    CSI 37.96
    rCSI 61.05%
    PRS 68.32
  • lamp5 GABAergic cortical interneuron CL4023011
    CSI 37.28
    rCSI 62.58%
    PRS 66.84
  • caudal ganglionic eminence derived cortical interneuron CL4023064
    CSI 36.1
    rCSI 63.76%
    PRS 66.41
  • astrocyte of the cerebral cortex CL0002605
    CSI 31.99
    rCSI 71.72%
    PRS 67.79
  • glioblast CL0000030
    CSI 31.84
    rCSI 50.79%
    PRS 75.46
  • cerebellar granule cell CL0001031
    CSI 29.79
    rCSI 43.79%
    PRS 77.12
  • L2/3 intratelencephalic projecting glutamatergic neuron CL4030059
    CSI 29.12
    rCSI 63.17%
    PRS 71.43
  • L4 intratelencephalic projecting glutamatergic neuron CL4030063
    CSI 28.37
    rCSI 67.85%
    PRS 70.94
  • neuron CL0000540
    CSI 26.76
    rCSI 71.25%
    PRS 71.17
  • glycinergic amacrine cell CL4030028
    CSI 26.36
    rCSI 68.67%
    PRS 77.94
  • differentiation-committed oligodendrocyte precursor CL4023059
    CSI 26.07
    rCSI 47.37%
    PRS 75.74
  • cardiac muscle cell CL0000746
    CSI 24.75
    rCSI 35.52%
    PRS 74.14
  • L2/3-6 intratelencephalic projecting glutamatergic neuron CL4023040
    CSI 24.39
    rCSI 59.27%
    PRS 64.8
  • radial glial cell CL0000681
    CSI 23.7
    rCSI 32.93%
    PRS 82.14
  • naive thymus-derived CD8-positive, alpha-beta T cell CL0000900
    CSI 23.64
    rCSI 16.61%
    PRS 93.93
  • retinal ganglion cell CL0000740
    CSI 22.42
    rCSI 49.52%
    PRS 70.36
  • interneuron CL0000099
    CSI 20.27
    rCSI 40.7%
    PRS 75.01
  • oligodendrocyte precursor cell CL0002453
    CSI 20.27
    rCSI 44.6%
    PRS 66.06
  • chandelier pvalb GABAergic cortical interneuron CL4023036
    CSI 19.95
    rCSI 62.39%
    PRS 70.72
  • L6b glutamatergic cortical neuron CL4023038
    CSI 19.88
    rCSI 62.13%
    PRS 68.43
  • inhibitory interneuron CL0000498
    CSI 18.66
    rCSI 43.08%
    PRS 72.27
  • L5/6 near-projecting glutamatergic neuron CL4030067
    CSI 18.55
    rCSI 60.96%
    PRS 69.99
  • central memory CD4-positive, alpha-beta T cell CL0000904
    CSI 18.11
    rCSI 10.7%
    PRS 96.02
  • GABAergic amacrine cell CL4030027
    CSI 17.64
    rCSI 60.43%
    PRS 69.89
  • L5 extratelencephalic projecting glutamatergic cortical neuron CL4023041
    CSI 16.32
    rCSI 58.72%
    PRS 64.82
  • near-projecting glutamatergic cortical neuron CL4023012
    CSI 15.88
    rCSI 60.01%
    PRS 67.39
  • forebrain radial glial cell CL0013000
    CSI 15.85
    rCSI 50.87%
    PRS 84.62
  • glutamatergic neuron CL0000679
    CSI 13.89
    rCSI 28.55%
    PRS 71.01
  • stromal cell CL0000499
    CSI 13.89
    rCSI 39.07%
    PRS 78.99
  • neuroblast (sensu Nematoda and Protostomia) CL0000338
    CSI 13.23
    rCSI 15.27%
    PRS 76.06
  • neural crest cell CL0011012
    CSI 12.57
    rCSI 9.93%
    PRS 73.81
  • retinal rod cell CL0000604
    CSI 12.56
    rCSI 22.14%
    PRS 79.03
  • amacrine cell CL0000561
    CSI 12.51
    rCSI 36.26%
    PRS 73.64
  • cerebral cortex endothelial cell CL1001602
    CSI 12.31
    rCSI 21.29%
    PRS 75.99
  • retinal bipolar neuron CL0000748
    CSI 11.69
    rCSI 21.89%
    PRS 72.86
  • podocyte CL0000653
    CSI 11.22
    rCSI 49.86%
    PRS 84.4
  • neuroblast (sensu Vertebrata) CL0000031
    CSI 11.04
    rCSI 14.17%
    PRS 80
  • invaginating midget bipolar cell CL4033034
    CSI 11.01
    rCSI 65.01%
    PRS 75.19
  • choroid plexus epithelial cell CL0000706
    CSI 10.84
    rCSI 17.75%
    PRS 74.08
  • colon epithelial cell CL0011108
    CSI 10.47
    rCSI 10.97%
    PRS 81.14
  • corticothalamic-projecting glutamatergic cortical neuron CL4023013
    CSI 10.44
    rCSI 61.49%
    PRS 67.43
  • macroglial cell CL0000126
    CSI 10.04
    rCSI 25.81%
    PRS 80.01
  • adipocyte CL0000136
    CSI 9.76
    rCSI 12.53%
    PRS 74.28
  • epithelial cell of proximal tubule CL0002306
    CSI 9.74
    rCSI 23.8%
    PRS 76.23
  • BEST4+ enteroycte CL4030026
    CSI 9.7
    rCSI 12.07%
    PRS 84.38
  • rod bipolar cell CL0000751
    CSI 9.45
    rCSI 16.98%
    PRS 77.45
  • melanocyte CL0000148
    CSI 9.32
    rCSI 6.91%
    PRS 77.94
  • vascular leptomeningeal cell CL4023051
    CSI 9.08
    rCSI 15.92%
    PRS 78.12
  • kidney interstitial alternatively activated macrophage CL1000695
    CSI 9.07
    rCSI 23.65%
    PRS 84.69
  • regular atrial cardiac myocyte CL0002129
    CSI 8.37
    rCSI 26.95%
    PRS 80.59
  • renal alpha-intercalated cell CL0005011
    CSI 8.28
    rCSI 11.08%
    PRS 88.78
  • naive B cell CL0000788
    CSI 8.19
    rCSI 7.03%
    PRS 88.95
  • kidney connecting tubule epithelial cell CL1000768
    CSI 7.93
    rCSI 20.12%
    PRS 74.95
  • secretory cell CL0000151
    CSI 7.66
    rCSI 7.99%
    PRS 83
  • Mueller cell CL0000636
    CSI 7.6
    rCSI 17.34%
    PRS 75.7
  • myoepithelial cell CL0000185
    CSI 7.48
    rCSI 18.92%
    PRS 87.7
  • alpha-beta T cell CL0000789
    CSI 7.39
    rCSI 8.66%
    PRS 94.44
  • blood vessel endothelial cell CL0000071
    CSI 7.34
    rCSI 15.23%
    PRS 80.81
  • diffuse bipolar 3b cell CL4033030
    CSI 7.22
    rCSI 47.89%
    PRS 78.21
  • pro-B cell CL0000826
    CSI 7.21
    rCSI 5.97%
    PRS 85.88
  • alveolar type 1 fibroblast cell CL4028004
    CSI 7.18
    rCSI 7.87%
    PRS 85.41
  • cerebral cortex GABAergic interneuron CL0010011
    CSI 7.1
    rCSI 20.95%
    PRS 84.29
  • ON-bipolar cell CL0000749
    CSI 6.9
    rCSI 10.26%
    PRS 83.19
  • Schwann cell CL0002573
    CSI 6.61
    rCSI 18.8%
    PRS 79.46
  • pulmonary ionocyte CL0017000
    CSI 6.5
    rCSI 7.92%
    PRS 89.22
  • ciliated epithelial cell CL0000067
    CSI 6.4
    rCSI 5.63%
    PRS 73.52
  • mature T cell CL0002419
    CSI 6.3
    rCSI 4.9%
    PRS 94.6
  • enteric smooth muscle cell CL0002504
    CSI 6.16
    rCSI 8.78%
    PRS 84.33
  • lung pericyte CL0009089
    CSI 5.98
    rCSI 15.78%
    PRS 89.24
  • mature astrocyte CL0002627
    CSI 5.96
    rCSI 25.31%
    PRS 76.13
  • retinal cone cell CL0000573
    CSI 5.76
    rCSI 9.27%
    PRS 74.43
  • hepatic stellate cell CL0000632
    CSI 5.47
    rCSI 20.49%
    PRS 76.75
  • megakaryocyte-erythroid progenitor cell CL0000050
    CSI 5.39
    rCSI 4.87%
    PRS 82.23
  • lung neuroendocrine cell CL1000223
    CSI 5.35
    rCSI 7.92%
    PRS 86.66
  • kidney loop of Henle thin descending limb epithelial cell CL1001111
    CSI 5.32
    rCSI 7.54%
    PRS 80.79
  • Kupffer cell CL0000091
    CSI 4.94
    rCSI 11.29%
    PRS 84.55
  • cardiac neuron CL0010022
    CSI 4.86
    rCSI 15.54%
    PRS 81.46
  • cerebral cortex pyramidal neuron CL4023111
    CSI 4.8
    rCSI 29.55%
    PRS 87.29
  • renal interstitial pericyte CL1001318
    CSI 4.77
    rCSI 13.16%
    PRS 79.27
  • peripheral nervous system neuron CL2000032
    CSI 4.77
    rCSI 6.5%
    PRS 75.75
  • alveolar adventitial fibroblast CL4028006
    CSI 4.73
    rCSI 7.47%
    PRS 84.96
  • GABAergic neuron CL0000617
    CSI 4.69
    rCSI 15.72%
    PRS 68
  • transit amplifying cell of colon CL0009011
    CSI 4.68
    rCSI 5.5%
    PRS 85.12
  • pulmonary alveolar type 1 cell CL0002062
    CSI 4.67
    rCSI 26.92%
    PRS 80.07
  • bronchus fibroblast of lung CL2000093
    CSI 4.67
    rCSI 3.79%
    PRS 83.14
  • plasmacytoid dendritic cell, human CL0001058
    CSI 4.67
    rCSI 3.26%
    PRS 87.01
  • tuft cell of colon CL0009041
    CSI 4.64
    rCSI 10.81%
    PRS 88.03
  • fibroblast of cardiac tissue CL0002548
    CSI 4.62
    rCSI 22.13%
    PRS 83.75
  • diffuse bipolar 4 cell CL4033031
    CSI 4.51
    rCSI 51.64%
    PRS 72.31
  • cardiac endothelial cell CL0010008
    CSI 4.5
    rCSI 18.15%
    PRS 83.88
  • retina horizontal cell CL0000745
    CSI 4.46
    rCSI 6.8%
    PRS 80.57
  • diffuse bipolar 3a cell CL4033029
    CSI 4.38
    rCSI 29.81%
    PRS 75.89
  • mesothelial cell CL0000077
    CSI 4.35
    rCSI 17%
    PRS 63.28
  • ON parasol ganglion cell CL4033052
    CSI 4.28
    rCSI 60.8%
    PRS 75.18
  • epithelial cell of lower respiratory tract CL0002632
    CSI 4.28
    rCSI 3.32%
    PRS 87.08
  • contractile cell CL0000183
    CSI 4.2
    rCSI 12.41%
    PRS 82.85
  • pancreatic ductal cell CL0002079
    CSI 0.8
    rCSI 1.6%
    PRS 86.6%
  • enterocyte of epithelium of small intestine CL1000334
    CSI 0.9
    rCSI 14.4%
    PRS 89.7%
  • Cajal-Retzius cell CL0000695
    CSI 1.1
    rCSI 8.2%
    PRS 87.2%
  • enteroglial cell CL4040002
    CSI 1.1
    rCSI 5.9%
    PRS 84.8%
  • placental villous trophoblast CL2000060
    CSI 1.2
    rCSI 1.8%
    PRS 82.6%
  • type B pancreatic cell CL0000169
    CSI 1.2
    rCSI 2.7%
    PRS 83.3%
  • starburst amacrine cell CL0004232
    CSI 1.3
    rCSI 10.6%
    PRS 71.5%
  • eye photoreceptor cell CL0000287
    CSI 1.3
    rCSI 14.4%
    PRS 89.9%
  • neural progenitor cell CL0011020
    CSI 1.4
    rCSI 6.1%
    PRS 72.2%
  • transit amplifying cell of small intestine CL0009012
    CSI 1.4
    rCSI 6.1%
    PRS 89.9%
  • paneth cell of epithelium of small intestine CL1000343
    CSI 1.5
    rCSI 4.1%
    PRS 89.1%
  • diffuse bipolar 1 cell CL4033027
    CSI 1.5
    rCSI 11.0%
    PRS 73.6%
  • effector memory CD4-positive, alpha-beta T cell CL0000905
    CSI 1.5
    rCSI 2.1%
    PRS 96.3%
  • enterocyte of epithelium of large intestine CL0002071
    CSI 1.6
    rCSI 8.3%
    PRS 87.8%
  • H2 horizontal cell CL0004218
    CSI 1.7
    rCSI 8.4%
    PRS 78.1%
  • kidney loop of Henle thick ascending limb epithelial cell CL1001106
    CSI 1.8
    rCSI 15.2%
    PRS 78.2%
  • enteroendocrine cell of small intestine CL0009006
    CSI 1.8
    rCSI 4.0%
    PRS 89.7%
  • lung ciliated cell CL1000271
    CSI 1.8
    rCSI 2.1%
    PRS 76.7%
  • intestinal epithelial cell CL0002563
    CSI 1.9
    rCSI 1.9%
    PRS 81.3%
  • kidney distal convoluted tubule epithelial cell CL1000849
    CSI 1.9
    rCSI 20.0%
    PRS 79.9%
  • extravillous trophoblast CL0008036
    CSI 1.9
    rCSI 2.4%
    PRS 82.0%
  • pancreatic A cell CL0000171
    CSI 2.0
    rCSI 2.1%
    PRS 86.7%
  • conjunctival epithelial cell CL1000432
    CSI 2.0
    rCSI 3.1%
    PRS 83.7%
  • common dendritic progenitor CL0001029
    CSI 2.1
    rCSI 2.6%
    PRS 90.8%
  • duct epithelial cell CL0000068
    CSI 2.1
    rCSI 3.1%
    PRS 88.1%
  • ionocyte CL0005006
    CSI 2.2
    rCSI 2.4%
    PRS 85.4%
  • OFF-bipolar cell CL0000750
    CSI 2.2
    rCSI 3.1%
    PRS 84.7%
  • regular ventricular cardiac myocyte CL0002131
    CSI 2.2
    rCSI 14.0%
    PRS 76.1%
  • progenitor cell CL0011026
    CSI 2.3
    rCSI 4.8%
    PRS 77.6%
  • pancreatic acinar cell CL0002064
    CSI 2.3
    rCSI 3.1%
    PRS 88.4%
  • lymphoid lineage restricted progenitor cell CL0000838
    CSI 2.4
    rCSI 9.2%
    PRS 95.3%
  • small intestine goblet cell CL1000495
    CSI 2.5
    rCSI 5.4%
    PRS 88.0%
  • lung secretory cell CL1000272
    CSI 2.5
    rCSI 6.2%
    PRS 83.9%
  • hepatocyte CL0000182
    CSI 2.5
    rCSI 4.5%
    PRS 82.8%
  • indirect pathway medium spiny neuron CL4023029
    CSI 2.6
    rCSI 63.2%
    PRS 65.3%
  • colon goblet cell CL0009039
    CSI 2.6
    rCSI 6.2%
    PRS 87.6%
  • CD14-low, CD16-positive monocyte CL0002396
    CSI 2.6
    rCSI 2.0%
    PRS 86.8%
  • direct pathway medium spiny neuron CL4023026
    CSI 2.7
    rCSI 63.4%
    PRS 64.8%
  • pancreatic D cell CL0000173
    CSI 2.7
    rCSI 2.6%
    PRS 85.8%
  • interstitial cell of Cajal CL0002088
    CSI 2.7
    rCSI 3.5%
    PRS 88.3%
  • renal principal cell CL0005009
    CSI 2.7
    rCSI 7.1%
    PRS 83.6%
  • respiratory suprabasal cell CL4033048
    CSI 2.8
    rCSI 3.6%
    PRS 86.4%
  • midbrain dopaminergic neuron CL2000097
    CSI 2.8
    rCSI 18.1%
    PRS 78.9%
  • retinal pigment epithelial cell CL0002586
    CSI 2.9
    rCSI 5.8%
    PRS 79.6%
  • blood vessel smooth muscle cell CL0019018
    CSI 2.9
    rCSI 23.8%
    PRS 78.7%
  • microcirculation associated smooth muscle cell CL0008035
    CSI 3.0
    rCSI 8.6%
    PRS 82.9%
  • OFF midget ganglion cell CL4033047
    CSI 3.0
    rCSI 61.0%
    PRS 74.8%
  • ON midget ganglion cell CL4033046
    CSI 3.0
    rCSI 61.8%
    PRS 73.8%
  • common myeloid progenitor CL0000049
    CSI 3.1
    rCSI 2.5%
    PRS 85.7%
  • mesodermal cell CL0000222
    CSI 3.2
    rCSI 3.9%
    PRS 81.8%
  • chondrocyte CL0000138
    CSI 3.3
    rCSI 5.2%
    PRS 77.2%
  • S cone cell CL0003050
    CSI 3.4
    rCSI 14.8%
    PRS 78.3%
  • OFFx cell CL4033036
    CSI 3.4
    rCSI 15.9%
    PRS 74.8%
  • intestinal crypt stem cell of small intestine CL0009017
    CSI 3.4
    rCSI 9.2%
    PRS 87.4%
  • glial cell CL0000125
    CSI 3.5
    rCSI 13.3%
    PRS 75.3%
  • kidney loop of Henle thin ascending limb epithelial cell CL1001107
    CSI 3.6
    rCSI 9.3%
    PRS 79.6%
  • parietal epithelial cell CL1000452
    CSI 3.6
    rCSI 9.7%
    PRS 76.2%
  • epithelial cell of lung CL0000082
    CSI 3.6
    rCSI 3.0%
    PRS 84.8%
  • endocardial cell CL0002350
    CSI 3.8
    rCSI 18.0%
    PRS 79.8%
  • renal beta-intercalated cell CL0002201
    CSI 3.8
    rCSI 9.0%
    PRS 83.4%
  • cerebral cortex neuron CL0010012
    CSI 3.9
    rCSI 15.9%
    PRS 75.7%
  • diffuse bipolar 2 cell CL4033028
    CSI 4.1
    rCSI 31.7%
    PRS 77.5%
  • flat midget bipolar cell CL4033033
    CSI 4.2
    rCSI 29.8%
    PRS 74.5%
  • contractile cell CL0000183
    CSI 4.2
    rCSI 12.4%
    PRS 82.9%
  • epithelial cell of lower respiratory tract CL0002632
    CSI 4.3
    rCSI 3.3%
    PRS 87.1%
  • ON parasol ganglion cell CL4033052
    CSI 4.3
    rCSI 60.8%
    PRS 75.2%
  • mesothelial cell CL0000077
    CSI 4.4
    rCSI 17.0%
    PRS 63.3%
  • diffuse bipolar 3a cell CL4033029
    CSI 4.4
    rCSI 29.8%
    PRS 75.9%
  • retina horizontal cell CL0000745
    CSI 4.5
    rCSI 6.8%
    PRS 80.6%
  • cardiac endothelial cell CL0010008
    CSI 4.5
    rCSI 18.2%
    PRS 83.9%
  • diffuse bipolar 4 cell CL4033031
    CSI 4.5
    rCSI 51.6%
    PRS 72.3%
  • fibroblast of cardiac tissue CL0002548
    CSI 4.6
    rCSI 22.1%
    PRS 83.8%
  • tuft cell of colon CL0009041
    CSI 4.6
    rCSI 10.8%
    PRS 88.0%
  • plasmacytoid dendritic cell, human CL0001058
    CSI 4.7
    rCSI 3.3%
    PRS 87.0%
  • bronchus fibroblast of lung CL2000093
    CSI 4.7
    rCSI 3.8%
    PRS 83.1%
  • pulmonary alveolar type 1 cell CL0002062
    CSI 4.7
    rCSI 26.9%
    PRS 80.1%
  • transit amplifying cell of colon CL0009011
    CSI 4.7
    rCSI 5.5%
    PRS 85.1%
  • GABAergic neuron CL0000617
    CSI 4.7
    rCSI 15.7%
    PRS 68.0%
  • alveolar adventitial fibroblast CL4028006
    CSI 4.7
    rCSI 7.5%
    PRS 85.0%
  • peripheral nervous system neuron CL2000032
    CSI 4.8
    rCSI 6.5%
    PRS 75.8%
  • renal interstitial pericyte CL1001318
    CSI 4.8
    rCSI 13.2%
    PRS 79.3%
  • cerebral cortex pyramidal neuron CL4023111
    CSI 4.8
    rCSI 29.6%
    PRS 87.3%
  • cardiac neuron CL0010022
    CSI 4.9
    rCSI 15.5%
    PRS 81.5%
  • Kupffer cell CL0000091
    CSI 4.9
    rCSI 11.3%
    PRS 84.6%
  • kidney loop of Henle thin descending limb epithelial cell CL1001111
    CSI 5.3
    rCSI 7.5%
    PRS 80.8%
  • lung neuroendocrine cell CL1000223
    CSI 5.4
    rCSI 7.9%
    PRS 86.7%
  • megakaryocyte-erythroid progenitor cell CL0000050
    CSI 5.4
    rCSI 4.9%
    PRS 82.2%
  • hepatic stellate cell CL0000632
    CSI 5.5
    rCSI 20.5%
    PRS 76.8%
  • retinal cone cell CL0000573
    CSI 5.8
    rCSI 9.3%
    PRS 74.4%
  • mature astrocyte CL0002627
    CSI 6.0
    rCSI 25.3%
    PRS 76.1%
  • lung pericyte CL0009089
    CSI 6.0
    rCSI 15.8%
    PRS 89.2%
  • enteric smooth muscle cell CL0002504
    CSI 6.2
    rCSI 8.8%
    PRS 84.3%
  • mature T cell CL0002419
    CSI 6.3
    rCSI 4.9%
    PRS 94.6%
  • ciliated epithelial cell CL0000067
    CSI 6.4
    rCSI 5.6%
    PRS 73.5%
  • pulmonary ionocyte CL0017000
    CSI 6.5
    rCSI 7.9%
    PRS 89.2%
  • Schwann cell CL0002573
    CSI 6.6
    rCSI 18.8%
    PRS 79.5%
  • ON-bipolar cell CL0000749
    CSI 6.9
    rCSI 10.3%
    PRS 83.2%
  • cerebral cortex GABAergic interneuron CL0010011
    CSI 7.1
    rCSI 21.0%
    PRS 84.3%
  • alveolar type 1 fibroblast cell CL4028004
    CSI 7.2
    rCSI 7.9%
    PRS 85.4%
  • pro-B cell CL0000826
    CSI 7.2
    rCSI 6.0%
    PRS 85.9%

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Network Configuration

Explore relationships of the current gene. Select an Interaction Source: 'ONTOLOGY' for shared pathways (GO/Reactome) or 'STRING' for protein-protein interactions. Further refine by selecting context genes and comparing Cell Significance Index (CSI) scores between baseline and target cell types and their specific contexts.

Comma-separated if multiple.
Comma-separated if multiple.

Legend:
  • Query Gene
  • Node Color (Target Cell CSI, relative to current network):
    • Very High
    • High
    • Medium
    • Low
    • Very Low
    • CSI N/A
  • Node Size: Proportional to Target Cell CSI magnitude
  • STRING PPI Edge
  • Shared Pathway Edge (ONTOLOGY)

Loading network (please wait)...

Other Information

This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.

## Summary [TMEM161B DT](/details-gene/100505894) is a non-coding RNA (ncRNA) gene located on human chromosome 5q14.3. Expression data indicates that this gene is highly and specifically active within the central nervous system. Its significance is particularly pronounced across a diverse range of neuronal and glial cell types, most notably various subtypes of GABAergic cortical interneurons, including [pvalb](/details-cell/CL4023018), [VIP](/details-cell/CL4023016), and [sst](/details-cell/CL4023017) expressing cells. The high expression in these inhibitory [neurons](/details-cell/CL0000540) as well as in glial cells like [astrocytes](/details-cell/CL0002605) and [Bergmann glial cells](/details-cell/CL0000644), suggests a potential regulatory role in neural circuit function, glial support, and overall brain homeostasis. ## Cellular Roles and Expression Landscape The expression profile of [TMEM161B DT](/details-gene/100505894) demonstrates a profound enrichment within the central nervous system. **Overall**, the gene shows the highest significance in multiple, distinct classes of inhibitory interneurons, which are critical for regulating neural network activity. Top-ranking cell types include [pvalb GABAergic cortical interneurons](/details-cell/CL4023018) (CSI: 53.36), [VIP GABAergic cortical interneurons](/details-cell/CL4023016) (CSI: 51.47), and [sst GABAergic cortical interneurons](/details-cell/CL4023017) (CSI: 46.51). This pattern suggests a fundamental role for [TMEM161B DT](/details-gene/100505894) in the biology of cortical inhibitory circuits. Beyond interneurons, the gene is also significantly expressed in various glial populations. These include [Bergmann glial cells](/details-cell/CL0000644) (CSI: 39.76), [astrocytes of the cerebral cortex](/details-cell/CL0002605) (CSI: 31.99), and [differentiation-committed oligodendrocyte precursors](/details-cell/CL4023059) (CSI: 26.07), indicating a potential function in glial development, maintenance, or neuron-glia communication. Notably, [TMEM161B DT](/details-gene/100505894) also shows high significance in [glioblast](/details-cell/CL0000030) cells (CSI: 31.84), hinting at a possible involvement in the pathology of brain tumors. The gene's activity extends to other neuronal types as well, such as [cerebellar granule cells](/details-cell/CL0001031) and glutamatergic projecting [neurons](/details-cell/CL0000540), reinforcing its widespread importance in neural cell biology. ## Pathways and Molecular Function Detailed functional annotation for [TMEM161B DT](/details-gene/100505894) is not available in the provided dataset. As a non-coding RNA, its mechanism of action is likely regulatory. It may function by modulating the expression of adjacent or distal genes, acting as a scaffold for chromatin-modifying complexes, or influencing mRNA stability and translation. Elucidating its specific molecular interactions and downstream pathways is a key area for future investigation. ## Research Directions The highly specific expression pattern of [TMEM161B DT](/details-gene/100505894) in the central nervous system, particularly its dual significance in both healthy neural cells and malignant [glioblasts](/details-cell/CL0000030), opens several avenues for research. **Proposed Hypotheses:** 1. Given its high expression across multiple inhibitory interneuron subtypes, [TMEM161B DT](/details-gene/100505894) may be a master regulator of GABAergic neuron identity or function, essential for maintaining the excitatory/inhibitory balance in the cerebral cortex. 2. The significant expression of [TMEM161B DT](/details-gene/100505894) in [glioblast](/details-cell/CL0000030) cells suggests it may be co-opted during tumorigenesis, contributing to tumor cell proliferation, survival, or resistance to therapy. **Experimental Approach:** To test the hypothesis regarding its role in glioblastoma, one could perform a loss-of-function screen using CRISPR interference (CRISPRi) or antisense oligonucleotides (ASOs) to knockdown [TMEM161B DT](/details-gene/100505894) in patient-derived glioblastoma cell lines. The impact on cell viability, proliferation (e.g., via BrdU incorporation assays), and invasive potential (e.g., via Matrigel invasion assays) would be quantified. Subsequent RNA-sequencing of knockdown cells could identify the downstream pathways and target genes regulated by this ncRNA, potentially uncovering novel therapeutic targets. **Therapeutic Potential:** As a non-coding RNA with enriched expression in [glioblast](/details-cell/CL0000030) cells, [TMEM161B DT](/details-gene/100505894) presents a potential therapeutic target. An inhibitory strategy would be most appropriate. The development of brain-penetrant ASOs designed to specifically degrade the [TMEM161B DT](/details-gene/100505894) transcript could offer a novel therapeutic approach for glioblastoma, potentially slowing tumor growth or sensitizing cancer cells to existing chemotherapies. Its specificity to the CNS might limit peripheral toxicity, although on-target effects in healthy [neurons](/details-cell/CL0000540) and glia would need to be carefully evaluated.