Details for: NDFIP1

Gene ID: 80762

Gene Type:  Protein-coding  - A gene that serves as a template for producing a messenger RNA (mRNA) molecule, which is then translated into a functional protein.

Symbol: NDFIP1

Ensembl ID: ENSG00000131507

Description: Nedd4 family interacting protein 1

Selected Context(s):  Overall

Cell Significance Landscape

Contexts:

Associated with

Significant Cells

Cell Significance Index (CSI) scores for the chosen context(s)

  • pancreatic D cell CL0000173
    CSI 77.7
    rCSI 76.42%
    PRS 8.45
  • pancreatic A cell CL0000171
    CSI 70.2
    rCSI 73.55%
    PRS 8.28
  • retina horizontal cell CL0000745
    CSI 67.84
    rCSI 100%
    PRS 7.33
  • sncg GABAergic cortical interneuron CL4023015
    CSI 56.03
    rCSI 90.1%
    PRS 5.07
  • pvalb GABAergic cortical interneuron CL4023018
    CSI 55.65
    rCSI 69.23%
    PRS 4.22
  • peripheral nervous system neuron CL2000032
    CSI 55.03
    rCSI 74.98%
    PRS 6.99
  • VIP GABAergic cortical interneuron CL4023016
    CSI 54.58
    rCSI 65.19%
    PRS 4.57
  • sst GABAergic cortical interneuron CL4023017
    CSI 51.83
    rCSI 66.82%
    PRS 4.87
  • lamp5 GABAergic cortical interneuron CL4023011
    CSI 51.1
    rCSI 85.77%
    PRS 4.57
  • retinal ganglion cell CL0000740
    CSI 45.68
    rCSI 100%
    PRS 5.58
  • extravillous trophoblast CL0008036
    CSI 41.76
    rCSI 51.66%
    PRS 6.84
  • caudal ganglionic eminence derived cortical interneuron CL4023064
    CSI 41.11
    rCSI 72.6%
    PRS 4.6
  • L2/3-6 intratelencephalic projecting glutamatergic neuron CL4023040
    CSI 39.35
    rCSI 95.63%
    PRS 4.44
  • naive thymus-derived CD8-positive, alpha-beta T cell CL0000900
    CSI 37.33
    rCSI 26.22%
    PRS 21.81
  • retinal cone cell CL0000573
    CSI 36.97
    rCSI 59.51%
    PRS 5.96
  • naive thymus-derived CD4-positive, alpha-beta T cell CL0000895
    CSI 35.42
    rCSI 44.51%
    PRS 37.75
  • type B pancreatic cell CL0000169
    CSI 35.07
    rCSI 77.64%
    PRS 7.22
  • neuron CL0000540
    CSI 34.65
    rCSI 92.27%
    PRS 6.51
  • OFF-bipolar cell CL0000750
    CSI 33.46
    rCSI 45.75%
    PRS 13.21
  • pancreatic ductal cell CL0002079
    CSI 32.16
    rCSI 62.55%
    PRS 7.94
  • L6b glutamatergic cortical neuron CL4023038
    CSI 30.63
    rCSI 95.72%
    PRS 4.91
  • chandelier pvalb GABAergic cortical interneuron CL4023036
    CSI 28.76
    rCSI 89.95%
    PRS 5.3
  • ON-bipolar cell CL0000749
    CSI 28.08
    rCSI 41.74%
    PRS 9.73
  • L5 extratelencephalic projecting glutamatergic cortical neuron CL4023041
    CSI 27.07
    rCSI 97.4%
    PRS 4.21
  • glioblast CL0000030
    CSI 25.65
    rCSI 40.91%
    PRS 6.73
  • near-projecting glutamatergic cortical neuron CL4023012
    CSI 24.86
    rCSI 93.97%
    PRS 4.71
  • intestinal epithelial cell CL0002563
    CSI 24.56
    rCSI 25.67%
    PRS 8.2
  • L2/3 intratelencephalic projecting glutamatergic neuron CL4030059
    CSI 23.87
    rCSI 51.78%
    PRS 3.76
  • neuroblast (sensu Vertebrata) CL0000031
    CSI 23.62
    rCSI 30.31%
    PRS 7.63
  • retinal rod cell CL0000604
    CSI 22.17
    rCSI 39.08%
    PRS 7.88
  • forebrain radial glial cell CL0013000
    CSI 22.14
    rCSI 71.04%
    PRS 11.64
  • pancreatic PP cell CL0002275
    CSI 20.3
    rCSI 80.82%
    PRS 13.81
  • GABAergic amacrine cell CL4030027
    CSI 19.71
    rCSI 67.51%
    PRS 7.79
  • tracheal goblet cell CL1000329
    CSI 19.36
    rCSI 42.26%
    PRS 15.88
  • microcirculation associated smooth muscle cell CL0008035
    CSI 18.9
    rCSI 54.72%
    PRS 8.84
  • duct epithelial cell CL0000068
    CSI 17.72
    rCSI 25.93%
    PRS 8.26
  • H1 horizontal cell CL0004217
    CSI 17.64
    rCSI 69.86%
    PRS 13.12
  • keratocyte CL0002363
    CSI 16.02
    rCSI 38.52%
    PRS 12.05
  • H2 horizontal cell CL0004218
    CSI 15.79
    rCSI 78.51%
    PRS 9.61
  • corticothalamic-projecting glutamatergic cortical neuron CL4023013
    CSI 15.77
    rCSI 92.83%
    PRS 4.84
  • Mueller cell CL0000636
    CSI 14.57
    rCSI 33.24%
    PRS 7.09
  • pancreatic acinar cell CL0002064
    CSI 14.48
    rCSI 19.24%
    PRS 8.47
  • pancreatic epsilon cell CL0005019
    CSI 14.22
    rCSI 66.3%
    PRS 19.14
  • central memory CD4-positive, alpha-beta T cell CL0000904
    CSI 14.12
    rCSI 8.34%
    PRS 10.78
  • L4 intratelencephalic projecting glutamatergic neuron CL4030063
    CSI 13.36
    rCSI 31.95%
    PRS 4.03
  • mucous neck cell CL0000651
    CSI 13.03
    rCSI 18.78%
    PRS 12.6
  • fallopian tube secretory epithelial cell CL4030006
    CSI 12.64
    rCSI 12.16%
    PRS 8.07
  • neural crest cell CL0011012
    CSI 12.15
    rCSI 9.61%
    PRS 5.38
  • radial glial cell CL0000681
    CSI 11.93
    rCSI 16.58%
    PRS 8.08
  • activated CD4-positive, alpha-beta T cell CL0000896
    CSI 11.9
    rCSI 11%
    PRS 14.29
  • double-positive, alpha-beta thymocyte CL0000809
    CSI 11.77
    rCSI 11.99%
    PRS 11.2
  • bronchial goblet cell CL1000312
    CSI 11.74
    rCSI 46.91%
    PRS 17.25
  • perivascular cell CL4033054
    CSI 11.44
    rCSI 15.64%
    PRS 8.84
  • CD14-low, CD16-positive monocyte CL0002396
    CSI 11.21
    rCSI 8.63%
    PRS 7.06
  • interstitial cell of Cajal CL0002088
    CSI 10.57
    rCSI 13.45%
    PRS 9.05
  • mammary gland epithelial cell CL0002327
    CSI 10.49
    rCSI 36.79%
    PRS 14.19
  • S cone cell CL0003050
    CSI 10.23
    rCSI 44.97%
    PRS 5.85
  • interneuron CL0000099
    CSI 10.07
    rCSI 20.22%
    PRS 5.78
  • central nervous system neuron CL2000029
    CSI 10.05
    rCSI 73.88%
    PRS 3.73
  • pancreatic stellate cell CL0002410
    CSI 9.29
    rCSI 54.03%
    PRS 11.77
  • kidney epithelial cell CL0002518
    CSI 9.17
    rCSI 17.51%
    PRS 18.84
  • colon macrophage CL0009038
    CSI 9.12
    rCSI 42.12%
    PRS 16.74
  • eye photoreceptor cell CL0000287
    CSI 8.48
    rCSI 95.4%
    PRS 23.24
  • amacrine cell CL0000561
    CSI 8.42
    rCSI 24.41%
    PRS 6.37
  • enteroendocrine cell CL0000164
    CSI 8.42
    rCSI 11.5%
    PRS 8.63
  • renal alpha-intercalated cell CL0005011
    CSI 7.79
    rCSI 10.41%
    PRS 10.41
  • type EC enteroendocrine cell CL0000577
    CSI 7.59
    rCSI 26.96%
    PRS 12.83
  • helper T cell CL0000912
    CSI 7.48
    rCSI 10.58%
    PRS 11.21
  • luminal epithelial cell of mammary gland CL0002326
    CSI 7.38
    rCSI 13.42%
    PRS 11.9
  • CD4-positive, alpha-beta cytotoxic T cell CL0000934
    CSI 7.36
    rCSI 10.11%
    PRS 16.53
  • Hofbauer cell CL3000001
    CSI 6.61
    rCSI 12.48%
    PRS 9.69
  • intrahepatic cholangiocyte CL0002538
    CSI 6.49
    rCSI 15.58%
    PRS 14.53
  • L5/6 near-projecting glutamatergic neuron CL4030067
    CSI 6.33
    rCSI 20.8%
    PRS 3.61
  • ON parasol ganglion cell CL4033052
    CSI 6.2
    rCSI 88.02%
    PRS 5.33
  • central memory CD8-positive, alpha-beta T cell CL0000907
    CSI 6.11
    rCSI 4.12%
    PRS 9.38
  • retinal bipolar neuron CL0000748
    CSI 6.08
    rCSI 11.39%
    PRS 5.81
  • peptic cell CL0000155
    CSI 6.06
    rCSI 59.63%
    PRS 24.11
  • luminal cell of prostate epithelium CL0002340
    CSI 5.96
    rCSI 32.04%
    PRS 14.14
  • P/D1 enteroendocrine cell CL0002268
    CSI 5.88
    rCSI 31.99%
    PRS 19.75
  • enteroendocrine cell of colon CL0009042
    CSI 5.82
    rCSI 27.31%
    PRS 21.26
  • midbrain dopaminergic neuron CL2000097
    CSI 5.79
    rCSI 37.07%
    PRS 12.9
  • cerebral cortex GABAergic interneuron CL0010011
    CSI 5.69
    rCSI 16.78%
    PRS 9.76
  • cerebellar granule cell CL0001031
    CSI 5.54
    rCSI 8.14%
    PRS 7.54
  • respiratory goblet cell CL0002370
    CSI 5.35
    rCSI 58.23%
    PRS 14.97
  • tendon cell CL0000388
    CSI 5.19
    rCSI 13.48%
    PRS 23.25
  • endothelial cell of vascular tree CL0002139
    CSI 5.14
    rCSI 28.1%
    PRS 16.01
  • respiratory epithelial cell CL0002368
    CSI 5.07
    rCSI 31.31%
    PRS 25.82
  • skin fibroblast CL0002620
    CSI 5.04
    rCSI 4.35%
    PRS 12.83
  • secretory cell CL0000151
    CSI 4.9
    rCSI 5.12%
    PRS 8
  • stromal cell CL0000499
    CSI 4.75
    rCSI 13.35%
    PRS 11.23
  • serous secreting cell of bronchus submucosal gland CL4033005
    CSI 4.55
    rCSI 25.9%
    PRS 35.42
  • enteric neuron CL0007011
    CSI 4.5
    rCSI 66.48%
    PRS 20.95
  • ON midget ganglion cell CL4033046
    CSI 4.48
    rCSI 91.22%
    PRS 6.44
  • OFF midget ganglion cell CL4033047
    CSI 4.36
    rCSI 88.67%
    PRS 7.09
  • stromal cell of ovary CL0002132
    CSI 4.26
    rCSI 11.7%
    PRS 12.95
  • keratinocyte CL0000312
    CSI 4.23
    rCSI 3.55%
    PRS 9.32
  • cerebral cortex neuron CL0010012
    CSI 4.19
    rCSI 17.07%
    PRS 8.52
  • epithelial cell CL0000066
    CSI 4.15
    rCSI 6.37%
    PRS 11.19
  • CD8-positive, CD28-negative, alpha-beta regulatory T cell CL0000920
    CSI 4.02
    rCSI 8%
    PRS 13.29
  • stem cell CL0000034
    CSI 4.01
    rCSI 3.87%
    PRS 4.94
  • dopaminergic neuron CL0000700
    CSI -7.4
    rCSI -41.7%
    PRS 2.7%
  • tracheobronchial smooth muscle cell CL0019019
    CSI -7.4
    rCSI -13.0%
    PRS 10.3%
  • vascular leptomeningeal cell CL4023051
    CSI -5.0
    rCSI -8.8%
    PRS 5.9%
  • pulmonary capillary endothelial cell CL4028001
    CSI -2.4
    rCSI -4.6%
    PRS 12.5%
  • plasmacytoid dendritic cell, human CL0001058
    CSI -2.4
    rCSI -1.7%
    PRS 8.2%
  • common lymphoid progenitor CL0000051
    CSI -2.1
    rCSI -2.8%
    PRS 14.9%
  • neural cell CL0002319
    CSI -1.8
    rCSI -6.6%
    PRS 14.0%
  • IgA plasma cell CL0000987
    CSI -1.6
    rCSI -1.6%
    PRS 14.8%
  • small intestine goblet cell CL1000495
    CSI -1.5
    rCSI -3.3%
    PRS 10.6%
  • lung pericyte CL0009089
    CSI -1.4
    rCSI -3.6%
    PRS 9.3%
  • transit amplifying cell of colon CL0009011
    CSI -1.3
    rCSI -1.5%
    PRS 9.3%
  • endocardial cell CL0002350
    CSI -1.0
    rCSI -4.5%
    PRS 11.2%
  • pulmonary artery endothelial cell CL1001568
    CSI -0.8
    rCSI -1.1%
    PRS 12.0%
  • epicardial adipocyte CL1000309
    CSI -0.8
    rCSI -2.6%
    PRS 10.7%
  • muscle cell CL0000187
    CSI -0.4
    rCSI -0.8%
    PRS 18.7%
  • brush cell CL0002204
    CSI -0.4
    rCSI -0.8%
    PRS 21.7%
  • class switched memory B cell CL0000972
    CSI -0.3
    rCSI -0.2%
    PRS 13.2%
  • colonocyte CL1000347
    CSI -0.3
    rCSI -0.4%
    PRS 10.7%
  • CD8-positive, alpha-beta cytotoxic T cell CL0000794
    CSI -0.2
    rCSI -0.2%
    PRS 13.6%
  • granulocyte CL0000094
    CSI 0.0
    rCSI 0.1%
    PRS 9.8%
  • ventricular cardiac muscle cell CL2000046
    CSI 0.1
    rCSI 0.2%
    PRS 33.0%
  • parietal epithelial cell CL1000452
    CSI 0.1
    rCSI 0.2%
    PRS 7.3%
  • pro-T cell CL0000827
    CSI 0.1
    rCSI 1.9%
    PRS 51.2%
  • epithelial cell of esophagus CL0002252
    CSI 0.1
    rCSI 0.8%
    PRS 30.1%
  • Merkel cell CL0000242
    CSI 0.1
    rCSI 2.1%
    PRS 52.0%
  • pluripotent stem cell CL0002248
    CSI 0.1
    rCSI 3.5%
    PRS 18.8%
  • granulocyte monocyte progenitor cell CL0000557
    CSI 0.1
    rCSI 0.1%
    PRS 8.7%
  • myeloid lineage restricted progenitor cell CL0000839
    CSI 0.1
    rCSI 0.6%
    PRS 15.7%
  • hepatic stellate cell CL0000632
    CSI 0.1
    rCSI 0.5%
    PRS 6.7%
  • vein endothelial cell CL0002543
    CSI 0.1
    rCSI 0.4%
    PRS 33.8%
  • transit amplifying cell CL0009010
    CSI 0.1
    rCSI 0.2%
    PRS 12.7%
  • bronchiolar smooth muscle cell CL4033017
    CSI 0.1
    rCSI 2.1%
    PRS 25.7%
  • eosinophil CL0000771
    CSI 0.2
    rCSI 1.0%
    PRS 20.6%
  • basal cell CL0000646
    CSI 0.2
    rCSI 0.2%
    PRS 8.5%
  • diffuse bipolar 3b cell CL4033030
    CSI 0.2
    rCSI 1.2%
    PRS 9.2%
  • cardiac neuron CL0010022
    CSI 0.2
    rCSI 0.6%
    PRS 5.7%
  • CD14-positive, CD16-negative classical monocyte CL0002057
    CSI 0.2
    rCSI 1.4%
    PRS 17.9%
  • diffuse bipolar 2 cell CL4033028
    CSI 0.2
    rCSI 1.9%
    PRS 8.8%
  • cytotoxic T cell CL0000910
    CSI 0.2
    rCSI 1.4%
    PRS 11.8%
  • mature alpha-beta T cell CL0000791
    CSI 0.3
    rCSI 0.9%
    PRS 13.4%
  • CD8-alpha-alpha-positive, alpha-beta intraepithelial T cell CL0000915
    CSI 0.3
    rCSI 1.2%
    PRS 28.8%
  • erythroblast CL0000765
    CSI 0.3
    rCSI 0.7%
    PRS 13.2%
  • enteroglial cell CL4040002
    CSI 0.3
    rCSI 1.4%
    PRS 16.3%
  • megakaryocyte CL0000556
    CSI 0.3
    rCSI 1.2%
    PRS 14.3%
  • vasa recta descending limb cell CL1001285
    CSI 0.3
    rCSI 2.2%
    PRS 33.9%
  • macroglial cell CL0000126
    CSI 0.3
    rCSI 0.7%
    PRS 12.5%
  • periportal region hepatocyte CL0019026
    CSI 0.3
    rCSI 1.1%
    PRS 12.1%
  • transit amplifying cell of small intestine CL0009012
    CSI 0.3
    rCSI 1.3%
    PRS 14.6%
  • respiratory hillock cell CL4030023
    CSI 0.3
    rCSI 0.5%
    PRS 13.4%
  • type L enteroendocrine cell CL0002279
    CSI 0.3
    rCSI 0.6%
    PRS 15.4%
  • CD4-positive, CD25-positive, alpha-beta regulatory T cell CL0000792
    CSI 0.3
    rCSI 0.3%
    PRS 12.4%
  • regular atrial cardiac myocyte CL0002129
    CSI 0.3
    rCSI 1.0%
    PRS 8.9%
  • epithelial cell of nephron CL1000449
    CSI 0.3
    rCSI 3.1%
    PRS 34.0%
  • IgG plasma cell CL0000985
    CSI 0.3
    rCSI 0.4%
    PRS 13.5%
  • renal interstitial pericyte CL1001318
    CSI 0.4
    rCSI 1.0%
    PRS 7.9%
  • effector memory CD8-positive, alpha-beta T cell, terminally differentiated CL0001062
    CSI 0.4
    rCSI 1.8%
    PRS 10.3%
  • deuterosomal cell CL4033044
    CSI 0.4
    rCSI 1.3%
    PRS 13.4%
  • platelet CL0000233
    CSI 0.4
    rCSI 1.6%
    PRS 19.5%
  • effector CD4-positive, alpha-beta T cell CL0001044
    CSI 0.4
    rCSI 1.1%
    PRS 11.3%
  • endothelial cell of uterus CL0009095
    CSI 0.4
    rCSI 2.9%
    PRS 21.8%
  • basophil CL0000767
    CSI 0.4
    rCSI 0.9%
    PRS 16.7%
  • colon goblet cell CL0009039
    CSI 0.4
    rCSI 1.0%
    PRS 11.7%
  • enterocyte of epithelium of large intestine CL0002071
    CSI 0.4
    rCSI 2.2%
    PRS 14.6%
  • diffuse bipolar 6 cell CL4033032
    CSI 0.4
    rCSI 2.2%
    PRS 11.0%
  • paneth cell of colon CL0009009
    CSI 0.4
    rCSI 4.2%
    PRS 23.2%
  • CD8-positive, alpha-beta memory T cell, CD45RO-positive CL0001203
    CSI 0.4
    rCSI 0.5%
    PRS 11.1%
  • endothelial cell of pericentral hepatic sinusoid CL0019022
    CSI 0.4
    rCSI 1.4%
    PRS 13.8%
  • glial cell CL0000125
    CSI 0.4
    rCSI 1.7%
    PRS 8.3%
  • lung microvascular endothelial cell CL2000016
    CSI 0.4
    rCSI 8.6%
    PRS 26.8%
  • retinal blood vessel endothelial cell CL0002585
    CSI 0.5
    rCSI 0.7%
    PRS 8.5%
  • epithelial cell of proximal tubule CL0002306
    CSI 0.5
    rCSI 1.2%
    PRS 7.9%
  • mature microglial cell CL0002629
    CSI 0.5
    rCSI 2.1%
    PRS 12.5%
  • blood vessel smooth muscle cell CL0019018
    CSI 0.5
    rCSI 4.2%
    PRS 8.2%
  • starburst amacrine cell CL0004232
    CSI 0.5
    rCSI 4.4%
    PRS 8.8%
  • Purkinje cell CL0000121
    CSI 0.5
    rCSI 6.8%
    PRS 53.4%
  • common myeloid progenitor CL0000049
    CSI 0.5
    rCSI 0.4%
    PRS 7.7%
  • mesenchymal stem cell of adipose tissue CL0002570
    CSI 0.5
    rCSI 2.9%
    PRS 26.6%
  • basal-myoepithelial cell of mammary gland CL0002324
    CSI 0.5
    rCSI 1.0%
    PRS 17.3%
  • fibroblast of cardiac tissue CL0002548
    CSI 0.6
    rCSI 2.7%
    PRS 4.9%
  • megakaryocyte-erythroid progenitor cell CL0000050
    CSI 0.6
    rCSI 0.5%
    PRS 6.9%
  • pulmonary alveolar type 1 cell CL0002062
    CSI 0.6
    rCSI 3.3%
    PRS 11.1%
  • ciliated columnar cell of tracheobronchial tree CL0002145
    CSI 0.6
    rCSI 1.3%
    PRS 8.2%
  • regular ventricular cardiac myocyte CL0002131
    CSI 0.6
    rCSI 3.7%
    PRS 6.4%
  • invaginating midget bipolar cell CL4033034
    CSI 0.6
    rCSI 3.5%
    PRS 9.4%
  • mature B cell CL0000785
    CSI 0.6
    rCSI 0.5%
    PRS 9.6%
  • effector memory CD8-positive, alpha-beta T cell CL0000913
    CSI 0.6
    rCSI 0.6%
    PRS 12.1%
  • kidney connecting tubule principal cell CL4030018
    CSI 0.6
    rCSI 4.5%
    PRS 58.4%
  • immature B cell CL0000816
    CSI 0.6
    rCSI 0.5%
    PRS 11.7%
  • lung secretory cell CL1000272
    CSI 0.6
    rCSI 1.6%
    PRS 7.2%
  • mesangial cell CL0000650
    CSI 0.6
    rCSI 2.6%
    PRS 11.2%
  • lung endothelial cell CL1001567
    CSI 0.6
    rCSI 1.5%
    PRS 19.6%
  • common dendritic progenitor CL0001029
    CSI 0.6
    rCSI 0.8%
    PRS 9.9%
  • serotonergic neuron CL0000850
    CSI 0.7
    rCSI 3.0%
    PRS 2.5%
  • kidney interstitial alternatively activated macrophage CL1000695
    CSI 0.7
    rCSI 1.8%
    PRS 8.1%
  • vein endothelial cell of respiratory system CL4033008
    CSI 0.7
    rCSI 4.8%
    PRS 15.5%
  • neural progenitor cell CL0011020
    CSI 0.7
    rCSI 3.2%
    PRS 7.8%
  • OFFx cell CL4033036
    CSI 0.7
    rCSI 3.4%
    PRS 8.7%
  • Schwann cell CL0002573
    CSI 0.7
    rCSI 2.1%
    PRS 9.9%
  • ciliated cell CL0000064
    CSI 0.8
    rCSI 1.2%
    PRS 7.9%
  • osteoblast CL0000062
    CSI 0.8
    rCSI 19.0%
    PRS 58.9%

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Network Configuration

Explore relationships of the current gene. Select an Interaction Source: 'ONTOLOGY' for shared pathways (GO/Reactome) or 'STRING' for protein-protein interactions. Further refine by selecting context genes and comparing Cell Significance Index (CSI) scores between baseline and target cell types and their specific contexts.

Comma-separated if multiple.
Comma-separated if multiple.

Legend:
  • Query Gene
  • Node Color (Target Cell CSI, relative to current network):
    • Very High
    • High
    • Medium
    • Low
    • Very Low
    • CSI N/A
  • Node Size: Proportional to Target Cell CSI magnitude
  • STRING PPI Edge
  • Shared Pathway Edge (ONTOLOGY)

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Other Information

This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.

## Summary [NDFIP1](/details-gene/80762) (Nedd4 family interacting protein 1) encodes an adaptor protein that plays a crucial role in cellular protein quality control by recruiting members of the NEDD4 family of E3 ubiquitin ligases to their specific substrates, thereby targeting them for ubiquitination and subsequent degradation or trafficking. **Overall**, expression data reveals that [NDFIP1](/details-gene/80762) is a highly significant marker for specific endocrine cell types, particularly [pancreatic D cell](/details-cell/CL0000173) and [pancreatic A cell](/details-cell/CL0000171), as well as a wide array of neuronal subtypes, including various cortical interneurons and retinal cells. Its molecular functions are deeply intertwined with the regulation of ion transporters, intracellular iron homeostasis, and the modulation of key signaling pathways, including NF-kappaB and immune responses. ## Cellular Roles and Expression Landscape The expression profile of [NDFIP1](/details-gene/80762) points to a specialized role in discrete, highly active cell populations rather than broad housekeeping functions. Its most significant expression is observed in two major systems: the endocrine pancreas and the central nervous system. * **Pancreatic Endocrine Cells:** [NDFIP1](/details-gene/80762) shows exceptionally high significance in [pancreatic D cell](/details-cell/CL0000173) (CSI: 77.70) and [pancreatic A cell](/details-cell/CL0000171) (CSI: 70.20), suggesting a critical role in regulating hormone production or secretion in these cells. This is consistent with literature indicating its involvement in promoting the death of pancreatic beta cells, highlighting its potential role in islet cell homeostasis and pathology [Link](https://doi.org/10.1016/j.bbrc.2015.08.099). * **Nervous System:** The gene is a prominent marker across numerous neuronal subtypes. It is highly expressed in [retina horizontal cell](/details-cell/CL0000745) and various GABAergic cortical interneurons, including `sncg`, `pvalb`, `VIP`, and `sst` subtypes. This widespread yet specific expression within the nervous system is consistent with its documented function in regulating the divalent metal ion transporter DMT1, thereby preventing metal-induced toxicity in neurons [Link](https://doi.org/10.1073/pnas.0904880106). * **Immune System:** While not its most dominant context, [NDFIP1](/details-gene/80762) also shows significant expression in immune cells such as [naive thymus-derived CD8-positive, alpha-beta T cell](/details-cell/CL0000900), aligning with its known role in negatively regulating immune signaling pathways [Link](https://doi.org/10.4049/jimmunol.1201445). Conversely, [NDFIP1](/details-gene/80762) shows minimal to negative significance in cell types such as [dopaminergic neuron](/details-cell/CL0000700), [tracheobronchial smooth muscle cell](/details-cell/CL0019019), endothelial cells, and lymphoid progenitors. This pattern underscores its specialized function and distinguishes its role in certain neuronal populations (e.g., cortical interneurons) from others (e.g., dopaminergic neurons). ## Pathways and Molecular Function Functional annotation reveals [NDFIP1](/details-gene/80762) as a central hub in protein ubiquitination and cellular homeostasis. Its primary molecular function involves binding to NEDD4-like E3 ubiquitin ligases, thereby activating them and facilitating substrate recognition [Link](https://doi.org/10.1038/embor.2009.30). This mechanism underpins several key biological processes: * **Protein Ubiquitination and Degradation:** The gene is integral to the [ubiquitin-dependent protein catabolic process](/details-go/GO:0006511) and the [positive regulation of protein ubiquitination](/details-go/GO:0031398). Its localization to the [Golgi apparatus](/details-go/GO:0005794) and [endosome membrane](/details-go/GO:0010008) is consistent with its function in sorting and degrading membrane proteins. * **Ion Homeostasis:** [NDFIP1](/details-gene/80762) plays a critical role in [intracellular iron ion homeostasis](/details-go/GO:0006879) through its regulation of DMT1, a key transporter for divalent metals. By promoting DMT1 ubiquitination and removal from the cell surface, [NDFIP1](/details-gene/80762) protects neurons from metal-induced toxicity [Link](https://doi.org/10.1182/blood-2008-04-150953). This function is critical given its high expression in various neuronal populations. * **Immune Regulation:** The gene contributes to the [negative regulation of inflammatory response](/details-go/GO:0050728) and the [negative regulation of type 2 immune response](/details-go/GO:0002829). It has been shown to enhance the degradation of the MAVS protein, a key adaptor in the RIG-I-like receptor pathway, thereby dampening antiviral innate immunity [Link](https://doi.org/10.4049/jimmunol.1201445). It also participates in regulating T cell proliferation, such as in [Cd4-positive, alpha-beta t cell proliferation](/details-go/GO:0035739). * **Signal Transduction:** [NDFIP1](/details-gene/80762) is involved in the [positive regulation of canonical nf-kappab signal transduction](/details-go/GO:0043123), a central pathway in inflammation and cell survival [Link](https://doi.org/10.1038/sj.onc.1206406). It also influences PTEN/Akt and MAP kinase signaling, further positioning it as a key regulator of cellular fate [Link](https://doi.org/10.1073/pnas.0911714107). ## Research Directions The specific expression pattern of [NDFIP1](/details-gene/80762) in metabolically active and sensitive cells like neurons and pancreatic islets, combined with its function as a master regulator of protein degradation, suggests several avenues for future research. **Proposed Hypotheses:** 1. Given its high expression in [pancreatic A cell](/details-cell/CL0000171) and [pancreatic D cell](/details-cell/CL0000173) and its reported role in promoting beta cell death, it is hypothesized that **dysregulation of [NDFIP1](/details-gene/80762) activity contributes to pancreatic islet dysfunction in type 2 diabetes by altering the balance of ubiquitination and degradation of key proteins involved in hormone secretion and cell survival.** 2. Based on its neuroprotective role in preventing metal toxicity and its high expression in specific neuronal subtypes, it is hypothesized that **age-related decline or genetic variation in [NDFIP1](/details-gene/80762) function sensitizes cortical interneurons to iron-mediated oxidative stress, contributing to the cognitive deficits seen in neurodegenerative disorders.** **Experimental Approach:** To test the first hypothesis regarding its role in pancreatic islet dysfunction, a compelling approach would be to generate a conditional, islet-specific knockout of [NDFIP1](/details-gene/80762) in mice (e.g., using a Pdx1-Cre driver). These mice, along with control littermates, could be challenged with a high-fat diet to induce metabolic stress. The subsequent effects on glucose tolerance, insulin and glucagon secretion, and islet cell mass and architecture could be quantified. Furthermore, unbiased proteomics coupled with ubiquitome analysis of isolated islets from these mice could identify the specific substrates of [NDFIP1](/details-gene/80762)-mediated ubiquitination that are critical for islet cell function and survival. **Therapeutic Potential:** As an intracellular adaptor protein, [NDFIP1](/details-gene/80762) is a challenging drug target. However, its role in promoting pathological processes, such as beta cell death, suggests that its **inhibition** could be therapeutically beneficial. A potential strategy would be the development of small molecule inhibitors designed to disrupt the protein-protein interaction between [NDFIP1](/details-gene/80762) and its cognate NEDD4-family E3 ligases. Such an approach could prevent the aberrant degradation of key survival proteins in pancreatic islets or protect neurons from excessive degradation of ion transporters, offering a novel therapeutic avenue for metabolic or neurodegenerative diseases.

Genular Protein ID: 2526136289

Symbol: NFIP1_HUMAN

Name: NEDD4 family-interacting protein 1

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 12761501

Title: Large-scale identification and characterization of human genes that activate NF-kappaB and MAPK signaling pathways.

PubMed ID: 12761501

DOI: 10.1038/sj.onc.1206406

PubMed ID: 14702039

Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.

PubMed ID: 14702039

DOI: 10.1038/ng1285

PubMed ID: 16303743

Title: Signal sequence and keyword trap in silico for selection of full-length human cDNAs encoding secretion or membrane proteins from oligo-capped cDNA libraries.

PubMed ID: 16303743

DOI: 10.1093/dnares/12.2.117

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 17974005

Title: The full-ORF clone resource of the German cDNA consortium.

PubMed ID: 17974005

DOI: 10.1186/1471-2164-8-399

PubMed ID: 11748237

Title: N4WBP5, a potential target for ubiquitination by the Nedd4 family of proteins, is a novel Golgi-associated protein.

PubMed ID: 11748237

DOI: 10.1074/jbc.m110443200

PubMed ID: 18776082

Title: Regulation of the divalent metal ion transporter DMT1 and iron homeostasis by a ubiquitin-dependent mechanism involving Ndfips and WWP2.

PubMed ID: 18776082

DOI: 10.1182/blood-2008-04-150953

PubMed ID: 18819914

Title: Nedd4 family-interacting protein 1 (Ndfip1) is required for the exosomal secretion of Nedd4 family proteins.

PubMed ID: 18819914

DOI: 10.1074/jbc.m804120200

PubMed ID: 19343052

Title: Control of the activity of WW-HECT domain E3 ubiquitin ligases by NDFIP proteins.

PubMed ID: 19343052

DOI: 10.1038/embor.2009.30

PubMed ID: 19706893

Title: Divalent metal transporter 1 (DMT1) regulation by Ndfip1 prevents metal toxicity in human neurons.

PubMed ID: 19706893

DOI: 10.1073/pnas.0904880106

PubMed ID: 20534535

Title: Regulation of PTEN/Akt and MAP kinase signaling pathways by the ubiquitin ligase activators Ndfip1 and Ndfip2.

PubMed ID: 20534535

DOI: 10.1073/pnas.0911714107

PubMed ID: 23087404

Title: Ndfip1 negatively regulates RIG-I-dependent immune signaling by enhancing E3 ligase Smurf1-mediated MAVS degradation.

PubMed ID: 23087404

DOI: 10.4049/jimmunol.1201445

PubMed ID: 22223895

Title: Comparative large-scale characterisation of plant vs. mammal proteins reveals similar and idiosyncratic N-alpha acetylation features.

PubMed ID: 22223895

DOI: 10.1074/mcp.m111.015131

PubMed ID: 26319551

Title: Nedd4 family interacting protein 1 (Ndfip1) promotes death of pancreatic beta cells.

PubMed ID: 26319551

DOI: 10.1016/j.bbrc.2015.08.099

PubMed ID: 26363003

Title: Regulation of the human ether-a-go-go-related gene (hERG) potassium channel by Nedd4 family interacting proteins (Ndfips).

PubMed ID: 26363003

DOI: 10.1042/bj20141282

PubMed ID: 25631046

Title: Nedd4 family interacting protein 1 (Ndfip1) is required for ubiquitination and nuclear trafficking of BRCA1-associated ATM activator 1 (BRAT1) during the DNA damage response.

PubMed ID: 25631046

DOI: 10.1074/jbc.m114.613687

PubMed ID: 25632008

Title: Ndfip1 regulates itch ligase activity and airway inflammation via UbcH7.

PubMed ID: 25632008

DOI: 10.4049/jimmunol.1402742

PubMed ID: 25801959

Title: Ndfip1 represses cell proliferation by controlling Pten localization and signaling specificity.

PubMed ID: 25801959

DOI: 10.1093/jmcb/mjv020

Sequence Information:

  • Length: 221
  • Mass: 24899
  • Checksum: 526A579D7B32FCA4
  • Sequence:
  • MALALAALAA VEPACGSRYQ QLQNEEESGE PEQAAGDAPP PYSSISAESA AYFDYKDESG 
    FPKPPSYNVA TTLPSYDEAE RTKAEATIPL VPGRDEDFVG RDDFDDADQL RIGNDGIFML 
    TFFMAFLFNW IGFFLSFCLT TSAAGRYGAI SGFGLSLIKW ILIVRFSTYF PGYFDGQYWL 
    WWVFLVLGFL LFLRGFINYA KVRKMPETFS NLPRTRVLFI Y