Details for: TANC2

Gene ID: 26115

Gene Type:  Protein-coding  - A gene that serves as a template for producing a messenger RNA (mRNA) molecule, which is then translated into a functional protein.

Symbol: TANC2

Ensembl ID: ENSG00000170921

Description: tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2

Cell Significance Landscape

Associated with

Significant Cells

Cell Significance Index (CSI) scores for the chosen context(s)

  • pvalb GABAergic cortical interneuron CL4023018
    CSI 53.35
    rCSI 66.37%
    PRS 44.56
  • VIP GABAergic cortical interneuron CL4023016
    CSI 51.38
    rCSI 61.37%
    PRS 46.19
  • sst GABAergic cortical interneuron CL4023017
    CSI 50.96
    rCSI 65.69%
    PRS 47.66
  • sncg GABAergic cortical interneuron CL4023015
    CSI 42.8
    rCSI 68.83%
    PRS 48.33
  • lamp5 GABAergic cortical interneuron CL4023011
    CSI 39.53
    rCSI 66.35%
    PRS 46.38
  • differentiation-committed oligodendrocyte precursor CL4023059
    CSI 38.05
    rCSI 69.13%
    PRS 56.54
  • caudal ganglionic eminence derived cortical interneuron CL4023064
    CSI 34.69
    rCSI 61.27%
    PRS 45.48
  • oligodendrocyte precursor cell CL0002453
    CSI 34.61
    rCSI 76.15%
    PRS 47.83
  • L2/3 intratelencephalic projecting glutamatergic neuron CL4030059
    CSI 29.29
    rCSI 63.55%
    PRS 52.54
  • L2/3-6 intratelencephalic projecting glutamatergic neuron CL4023040
    CSI 27.79
    rCSI 67.55%
    PRS 44.85
  • neuron CL0000540
    CSI 27.51
    rCSI 73.26%
    PRS 54.23
  • L6b glutamatergic cortical neuron CL4023038
    CSI 22.13
    rCSI 69.17%
    PRS 48.05
  • L5/6 near-projecting glutamatergic neuron CL4030067
    CSI 21.81
    rCSI 71.69%
    PRS 51.76
  • intermediate monocyte CL0002393
    CSI 21.64
    rCSI 32.65%
    PRS 69.49
  • mononuclear phagocyte CL0000113
    CSI 20.87
    rCSI 45.93%
    PRS 68.93
  • chandelier pvalb GABAergic cortical interneuron CL4023036
    CSI 20.33
    rCSI 63.57%
    PRS 50.46
  • kidney loop of Henle thin ascending limb epithelial cell CL1001107
    CSI 20.02
    rCSI 51.75%
    PRS 59.98
  • retinal bipolar neuron CL0000748
    CSI 19.72
    rCSI 36.93%
    PRS 53.13
  • L5 extratelencephalic projecting glutamatergic cortical neuron CL4023041
    CSI 19.07
    rCSI 68.61%
    PRS 44.69
  • extravillous trophoblast CL0008036
    CSI 18.88
    rCSI 23.36%
    PRS 61.65
  • blood vessel endothelial cell CL0000071
    CSI 18.47
    rCSI 38.33%
    PRS 62.15
  • near-projecting glutamatergic cortical neuron CL4023012
    CSI 18.13
    rCSI 68.53%
    PRS 47.02
  • neuroblast (sensu Nematoda and Protostomia) CL0000338
    CSI 17.98
    rCSI 20.76%
    PRS 57.84
  • kidney connecting tubule epithelial cell CL1000768
    CSI 17.95
    rCSI 45.54%
    PRS 54.39
  • glutamatergic neuron CL0000679
    CSI 16.98
    rCSI 34.9%
    PRS 54.71
  • Mueller cell CL0000636
    CSI 16.58
    rCSI 37.83%
    PRS 56.58
  • L4 intratelencephalic projecting glutamatergic neuron CL4030063
    CSI 16.02
    rCSI 38.32%
    PRS 52
  • retinal ganglion cell CL0000740
    CSI 15.89
    rCSI 35.11%
    PRS 50.93
  • choroid plexus epithelial cell CL0000706
    CSI 15.73
    rCSI 25.76%
    PRS 54.03
  • GABAergic amacrine cell CL4030027
    CSI 15.44
    rCSI 52.87%
    PRS 53.45
  • inhibitory interneuron CL0000498
    CSI 14.71
    rCSI 33.96%
    PRS 53.6
  • radial glial cell CL0000681
    CSI 14.48
    rCSI 20.11%
    PRS 63.44
  • lung secretory cell CL1000272
    CSI 14.03
    rCSI 34.72%
    PRS 63.55
  • cerebral cortex endothelial cell CL1001602
    CSI 13.49
    rCSI 23.33%
    PRS 55.13
  • renal principal cell CL0005009
    CSI 13.36
    rCSI 34.7%
    PRS 68.25
  • intestinal tuft cell CL0019032
    CSI 13.33
    rCSI 20.37%
    PRS 69.24
  • Kupffer cell CL0000091
    CSI 12.75
    rCSI 29.16%
    PRS 64.99
  • fallopian tube secretory epithelial cell CL4030006
    CSI 12.6
    rCSI 12.13%
    PRS 64.8
  • adipocyte CL0000136
    CSI 12.32
    rCSI 15.81%
    PRS 57.14
  • interneuron CL0000099
    CSI 12.23
    rCSI 24.56%
    PRS 53.97
  • enteric smooth muscle cell CL0002504
    CSI 12.13
    rCSI 17.31%
    PRS 66.93
  • OFFx cell CL4033036
    CSI 11.81
    rCSI 55.54%
    PRS 59.28
  • kidney interstitial alternatively activated macrophage CL1000695
    CSI 11.78
    rCSI 30.7%
    PRS 64.74
  • corticothalamic-projecting glutamatergic cortical neuron CL4023013
    CSI 11.55
    rCSI 68.03%
    PRS 47.52
  • glioblast CL0000030
    CSI 11.51
    rCSI 18.36%
    PRS 57.29
  • vascular leptomeningeal cell CL4023051
    CSI 11.44
    rCSI 20.06%
    PRS 57.02
  • neural crest cell CL0011012
    CSI 11.22
    rCSI 8.86%
    PRS 51.83
  • diffuse bipolar 3a cell CL4033029
    CSI 11.2
    rCSI 76.23%
    PRS 59.77
  • progenitor cell CL0011026
    CSI 11.15
    rCSI 23.72%
    PRS 63.4
  • mucus secreting cell CL0000319
    CSI 11.12
    rCSI 17.65%
    PRS 75.76
  • neuroblast (sensu Vertebrata) CL0000031
    CSI 11.04
    rCSI 14.17%
    PRS 61.95
  • podocyte CL0000653
    CSI 10.95
    rCSI 48.65%
    PRS 64.96
  • kidney loop of Henle thin descending limb epithelial cell CL1001111
    CSI 10.95
    rCSI 15.52%
    PRS 61.36
  • peripheral nervous system neuron CL2000032
    CSI 10.81
    rCSI 14.73%
    PRS 56.57
  • neural cell CL0002319
    CSI 10.57
    rCSI 39.88%
    PRS 50.46
  • diffuse bipolar 6 cell CL4033032
    CSI 10.42
    rCSI 54.81%
    PRS 59.02
  • chondrocyte CL0000138
    CSI 10.39
    rCSI 16.53%
    PRS 57.4
  • ependymal cell CL0000065
    CSI 10.37
    rCSI 21.04%
    PRS 43.87
  • cerebral cortex neuron CL0010012
    CSI 10.23
    rCSI 41.69%
    PRS 58.61
  • diffuse bipolar 3b cell CL4033030
    CSI 10.09
    rCSI 66.99%
    PRS 61.62
  • glycinergic amacrine cell CL4030028
    CSI 10.08
    rCSI 26.25%
    PRS 61.87
  • kidney collecting duct principal cell CL1001431
    CSI 9.81
    rCSI 49.36%
    PRS 64.83
  • ionocyte CL0005006
    CSI 9.72
    rCSI 10.42%
    PRS 64.84
  • S cone cell CL0003050
    CSI 9.46
    rCSI 41.56%
    PRS 61.26
  • innate lymphoid cell CL0001065
    CSI 9.43
    rCSI 19.46%
    PRS 65.46
  • diffuse bipolar 1 cell CL4033027
    CSI 9.2
    rCSI 69.12%
    PRS 57.93
  • secretory cell CL0000151
    CSI 9.11
    rCSI 9.5%
    PRS 65.31
  • rod bipolar cell CL0000751
    CSI 8.9
    rCSI 15.98%
    PRS 58.19
  • central nervous system neuron CL2000029
    CSI 8.74
    rCSI 64.27%
    PRS 51.48
  • diffuse bipolar 2 cell CL4033028
    CSI 8.68
    rCSI 67.21%
    PRS 61.06
  • epithelial cell of lung CL0000082
    CSI 8.56
    rCSI 7.1%
    PRS 64.47
  • cerebellar granule cell CL0001031
    CSI 8.27
    rCSI 12.16%
    PRS 58.2
  • medium spiny neuron CL1001474
    CSI 8.22
    rCSI 70.79%
    PRS 52.11
  • flat midget bipolar cell CL4033033
    CSI 8.14
    rCSI 58.22%
    PRS 57.56
  • retinal blood vessel endothelial cell CL0002585
    CSI 8.07
    rCSI 12.89%
    PRS 69.16
  • epithelial cell of proximal tubule CL0002306
    CSI 8.04
    rCSI 19.64%
    PRS 58.17
  • fibroblast of lung CL0002553
    CSI 7.99
    rCSI 7.43%
    PRS 65.58
  • oligodendrocyte CL0000128
    CSI 7.88
    rCSI 23.28%
    PRS 54.73
  • brush cell of tracheobronchial tree CL0002075
    CSI 7.87
    rCSI 23.37%
    PRS 74.65
  • retinal cone cell CL0000573
    CSI 7.79
    rCSI 12.55%
    PRS 54.47
  • keratinocyte CL0000312
    CSI 7.67
    rCSI 6.43%
    PRS 69
  • myoepithelial cell CL0000185
    CSI 7.58
    rCSI 19.18%
    PRS 72.7
  • conjunctival epithelial cell CL1000432
    CSI 7.54
    rCSI 11.51%
    PRS 65.71
  • basophil CL0000767
    CSI 7.46
    rCSI 15.77%
    PRS 81.34
  • elicited macrophage CL0000861
    CSI 7.42
    rCSI 6.81%
    PRS 73.93
  • kidney collecting duct intercalated cell CL1001432
    CSI 7.33
    rCSI 52.37%
    PRS 64.81
  • bronchus fibroblast of lung CL2000093
    CSI 7.3
    rCSI 5.93%
    PRS 65.29
  • medial ganglionic eminence derived interneuron CL4023063
    CSI 7.24
    rCSI 72.35%
    PRS 24.14
  • squamous epithelial cell CL0000076
    CSI 7.2
    rCSI 17.08%
    PRS 68.17
  • forebrain radial glial cell CL0013000
    CSI 7.2
    rCSI 23.09%
    PRS 69.63
  • cardiac muscle cell CL0000746
    CSI 7.18
    rCSI 10.31%
    PRS 54.5
  • inflammatory macrophage CL0000863
    CSI 7.17
    rCSI 12.24%
    PRS 86.27
  • Schwann cell CL0002573
    CSI 7
    rCSI 19.89%
    PRS 62.75
  • CD1c-positive myeloid dendritic cell CL0002399
    CSI 6.84
    rCSI 8.26%
    PRS 73.75
  • GABAergic neuron CL0000617
    CSI 6.79
    rCSI 22.75%
    PRS 49.79
  • basal cell CL0000646
    CSI 6.76
    rCSI 9.03%
    PRS 65.08
  • melanocyte CL0000148
    CSI 6.72
    rCSI 4.97%
    PRS 57.62
  • respiratory basal cell CL0002633
    CSI 6.54
    rCSI 6.78%
    PRS 70.76
  • endothelial cell of lymphatic vessel CL0002138
    CSI 6.49
    rCSI 12.86%
    PRS 77.61
  • alveolar type 1 fibroblast cell CL4028004
    CSI 6.48
    rCSI 7.09%
    PRS 68.65
  • respiratory goblet cell CL0002370
    CSI 0.2
    rCSI 1.8%
    PRS 78.7%
  • endothelial cell of placenta CL0009092
    CSI 0.6
    rCSI 2.9%
    PRS 75.7%
  • pancreatic PP cell CL0002275
    CSI 0.6
    rCSI 2.4%
    PRS 76.5%
  • bronchial goblet cell CL1000312
    CSI 0.8
    rCSI 3.2%
    PRS 79.3%
  • H1 horizontal cell CL0004217
    CSI 0.8
    rCSI 3.3%
    PRS 63.6%
  • mesangial cell CL0000650
    CSI 1.2
    rCSI 4.7%
    PRS 76.5%
  • blood vessel smooth muscle cell CL0019018
    CSI 1.2
    rCSI 9.4%
    PRS 58.3%
  • H2 horizontal cell CL0004218
    CSI 1.2
    rCSI 6.1%
    PRS 61.8%
  • tissue-resident macrophage CL0000864
    CSI 1.3
    rCSI 6.0%
    PRS 80.2%
  • airway submucosal gland duct basal cell CL4033024
    CSI 1.3
    rCSI 8.6%
    PRS 73.9%
  • pancreatic ductal cell CL0002079
    CSI 1.5
    rCSI 3.0%
    PRS 67.9%
  • cerebral cortex pyramidal neuron CL4023111
    CSI 1.6
    rCSI 9.6%
    PRS 77.9%
  • pancreatic A cell CL0000171
    CSI 1.6
    rCSI 1.6%
    PRS 68.5%
  • mesenchymal cell CL0008019
    CSI 1.6
    rCSI 4.2%
    PRS 59.0%
  • kidney distal convoluted tubule epithelial cell CL1000849
    CSI 1.7
    rCSI 17.5%
    PRS 63.0%
  • skeletal muscle satellite stem cell CL0008011
    CSI 1.7
    rCSI 7.7%
    PRS 79.8%
  • melanocyte of skin CL1000458
    CSI 1.8
    rCSI 2.4%
    PRS 34.6%
  • granulocyte CL0000094
    CSI 1.8
    rCSI 2.7%
    PRS 74.1%
  • pancreatic acinar cell CL0002064
    CSI 1.8
    rCSI 2.4%
    PRS 71.4%
  • neural progenitor cell CL0011020
    CSI 1.9
    rCSI 8.2%
    PRS 55.0%
  • starburst amacrine cell CL0004232
    CSI 1.9
    rCSI 15.9%
    PRS 55.5%
  • stromal cell CL0000499
    CSI 1.9
    rCSI 5.5%
    PRS 61.3%
  • corneal epithelial cell CL0000575
    CSI 2.0
    rCSI 5.6%
    PRS 76.1%
  • tuft cell of colon CL0009041
    CSI 2.0
    rCSI 4.7%
    PRS 75.5%
  • regular atrial cardiac myocyte CL0002129
    CSI 2.0
    rCSI 6.5%
    PRS 62.8%
  • mesodermal cell CL0000222
    CSI 2.1
    rCSI 2.5%
    PRS 63.1%
  • skeletal muscle satellite cell CL0000594
    CSI 2.1
    rCSI 6.1%
    PRS 84.6%
  • neuroendocrine cell CL0000165
    CSI 2.1
    rCSI 8.3%
    PRS 78.6%
  • pancreatic D cell CL0000173
    CSI 2.2
    rCSI 2.1%
    PRS 67.7%
  • group 3 innate lymphoid cell CL0001071
    CSI 2.4
    rCSI 1.8%
    PRS 70.6%
  • ciliated columnar cell of tracheobronchial tree CL0002145
    CSI 2.4
    rCSI 5.5%
    PRS 61.0%
  • alveolar adventitial fibroblast CL4028006
    CSI 2.4
    rCSI 3.8%
    PRS 67.5%
  • OFF-bipolar cell CL0000750
    CSI 2.4
    rCSI 3.3%
    PRS 71.0%
  • macroglial cell CL0000126
    CSI 2.5
    rCSI 6.5%
    PRS 63.9%
  • adventitial cell CL0002503
    CSI 2.6
    rCSI 6.3%
    PRS 73.0%
  • renal interstitial pericyte CL1001318
    CSI 2.8
    rCSI 7.6%
    PRS 60.3%
  • indirect pathway medium spiny neuron CL4023029
    CSI 2.8
    rCSI 66.9%
    PRS 46.2%
  • effector memory CD8-positive, alpha-beta T cell CL0000913
    CSI 2.8
    rCSI 2.5%
    PRS 79.3%
  • kidney loop of Henle thick ascending limb epithelial cell CL1001106
    CSI 2.8
    rCSI 24.0%
    PRS 61.5%
  • neuroplacodal cell CL0000032
    CSI 2.8
    rCSI 25.8%
    PRS 73.7%
  • direct pathway medium spiny neuron CL4023026
    CSI 2.8
    rCSI 67.1%
    PRS 45.4%
  • placental villous trophoblast CL2000060
    CSI 2.9
    rCSI 4.5%
    PRS 63.4%
  • interstitial cell of Cajal CL0002088
    CSI 2.9
    rCSI 3.8%
    PRS 71.2%
  • enteroglial cell CL4040002
    CSI 3.0
    rCSI 15.6%
    PRS 69.6%
  • OFF midget ganglion cell CL4033047
    CSI 3.0
    rCSI 61.7%
    PRS 56.9%
  • ON midget ganglion cell CL4033046
    CSI 3.1
    rCSI 62.0%
    PRS 55.4%
  • CD8-positive, alpha-beta memory T cell CL0000909
    CSI 3.1
    rCSI 3.2%
    PRS 85.2%
  • invaginating midget bipolar cell CL4033034
    CSI 3.1
    rCSI 18.5%
    PRS 59.3%
  • luminal epithelial cell of mammary gland CL0002326
    CSI 3.2
    rCSI 5.8%
    PRS 79.5%
  • CD14-low, CD16-positive monocyte CL0002396
    CSI 3.2
    rCSI 2.5%
    PRS 65.8%
  • BEST4+ enteroycte CL4030026
    CSI 3.2
    rCSI 4.0%
    PRS 66.6%
  • stem cell CL0000034
    CSI 3.3
    rCSI 3.2%
    PRS 55.9%
  • brush cell CL0002204
    CSI 3.3
    rCSI 6.5%
    PRS 79.9%
  • lung ciliated cell CL1000271
    CSI 3.3
    rCSI 3.8%
    PRS 55.3%
  • glial cell CL0000125
    CSI 3.3
    rCSI 12.7%
    PRS 55.5%
  • mature T cell CL0002419
    CSI 3.3
    rCSI 2.6%
    PRS 82.3%
  • diffuse bipolar 4 cell CL4033031
    CSI 3.4
    rCSI 38.5%
    PRS 55.5%
  • keratocyte CL0002363
    CSI 3.5
    rCSI 8.4%
    PRS 72.0%
  • cardiac blood vessel endothelial cell CL0010006
    CSI 3.7
    rCSI 25.9%
    PRS 56.9%
  • pulmonary alveolar type 1 cell CL0002062
    CSI 3.8
    rCSI 21.8%
    PRS 63.2%
  • GABAergic interneuron CL0011005
    CSI 3.8
    rCSI 60.0%
    PRS 69.3%
  • endocardial cell CL0002350
    CSI 4.0
    rCSI 19.0%
    PRS 63.1%
  • renal beta-intercalated cell CL0002201
    CSI 4.0
    rCSI 9.5%
    PRS 65.6%
  • type B pancreatic cell CL0000169
    CSI 4.1
    rCSI 9.0%
    PRS 63.1%
  • duct epithelial cell CL0000068
    CSI 4.1
    rCSI 6.0%
    PRS 70.1%
  • mature astrocyte CL0002627
    CSI 4.2
    rCSI 17.6%
    PRS 58.1%
  • ON parasol ganglion cell CL4033052
    CSI 4.2
    rCSI 59.7%
    PRS 55.9%
  • epicardial adipocyte CL1000309
    CSI 4.3
    rCSI 13.8%
    PRS 64.8%
  • endothelial cell of vascular tree CL0002139
    CSI 4.3
    rCSI 23.4%
    PRS 63.1%
  • retinal rod cell CL0000604
    CSI 4.5
    rCSI 7.9%
    PRS 61.5%
  • Bergmann glial cell CL0000644
    CSI 4.5
    rCSI 6.2%
    PRS 58.0%
  • pulmonary alveolar type 2 cell CL0002063
    CSI 4.6
    rCSI 7.1%
    PRS 72.1%
  • serotonergic neuron CL0000850
    CSI 4.7
    rCSI 20.8%
    PRS 49.0%
  • lung neuroendocrine cell CL1000223
    CSI 4.7
    rCSI 7.0%
    PRS 70.3%
  • hepatocyte CL0000182
    CSI 4.7
    rCSI 8.4%
    PRS 64.2%
  • alveolar macrophage CL0000583
    CSI 4.8
    rCSI 8.0%
    PRS 70.3%
  • fibroblast of cardiac tissue CL0002548
    CSI 4.9
    rCSI 23.4%
    PRS 65.0%
  • mature microglial cell CL0002629
    CSI 4.9
    rCSI 20.3%
    PRS 64.3%
  • macrophage CL0000235
    CSI 4.9
    rCSI 9.0%
    PRS 80.3%
  • brain vascular cell CL4023072
    CSI 5.0
    rCSI 51.7%
    PRS 58.9%
  • epithelial cell of lower respiratory tract CL0002632
    CSI 5.3
    rCSI 4.1%
    PRS 67.6%
  • dopaminergic neuron CL0000700
    CSI 5.3
    rCSI 30.1%
    PRS 50.1%
  • cardiac endothelial cell CL0010008
    CSI 5.4
    rCSI 21.6%
    PRS 64.0%
  • ON-bipolar cell CL0000749
    CSI 5.4
    rCSI 8.0%
    PRS 66.2%
  • mesothelial cell CL0000077
    CSI 5.4
    rCSI 21.0%
    PRS 41.9%
  • hepatic stellate cell CL0000632
    CSI 5.4
    rCSI 20.2%
    PRS 56.8%
  • amacrine cell CL0000561
    CSI 5.6
    rCSI 16.1%
    PRS 54.5%
  • neutrophil CL0000775
    CSI 5.6
    rCSI 31.2%
    PRS 70.9%
  • parietal epithelial cell CL1000452
    CSI 5.7
    rCSI 15.1%
    PRS 56.0%
  • astrocyte of the cerebral cortex CL0002605
    CSI 5.7
    rCSI 12.7%
    PRS 47.1%
  • CD14-positive monocyte CL0001054
    CSI 5.8
    rCSI 7.2%
    PRS 75.6%
  • microglial cell CL0000129
    CSI 5.8
    rCSI 23.5%
    PRS 68.9%
  • lung macrophage CL1001603
    CSI 5.9
    rCSI 13.2%
    PRS 72.8%
  • cardiac neuron CL0010022
    CSI 6.1
    rCSI 19.5%
    PRS 62.1%
  • subcutaneous adipocyte CL0002521
    CSI 6.1
    rCSI 31.5%
    PRS 69.9%
  • central nervous system macrophage CL0000878
    CSI 6.2
    rCSI 20.4%
    PRS 68.6%
  • alveolar type 1 fibroblast cell CL4028004
    CSI 6.5
    rCSI 7.1%
    PRS 68.7%
  • endothelial cell of lymphatic vessel CL0002138
    CSI 6.5
    rCSI 12.9%
    PRS 77.6%
  • respiratory basal cell CL0002633
    CSI 6.5
    rCSI 6.8%
    PRS 70.8%
  • melanocyte CL0000148
    CSI 6.7
    rCSI 5.0%
    PRS 57.6%

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Network Configuration

Explore relationships of the current gene. Select an Interaction Source: 'ONTOLOGY' for shared pathways (GO/Reactome) or 'STRING' for protein-protein interactions. Further refine by selecting context genes and comparing Cell Significance Index (CSI) scores between baseline and target cell types and their specific contexts.

Comma-separated if multiple.
Comma-separated if multiple.

Legend:
  • Query Gene
  • Node Color (Target Cell CSI, relative to current network):
    • Very High
    • High
    • Medium
    • Low
    • Very Low
    • CSI N/A
  • Node Size: Proportional to Target Cell CSI magnitude
  • STRING PPI Edge
  • Shared Pathway Edge (ONTOLOGY)

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Other Information

This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.

## Summary [TANC2](/details-gene/26115) (tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2) is a protein-coding gene located on chromosome 17q23.2-q23.3. It encodes a scaffolding protein that plays a crucial role in the central nervous system. Functional annotations and expression data strongly indicate its involvement in regulating neuronal structure, particularly in the development and morphogenesis of dendritic spines ([GO:0060998](https://www.ebi.ac.uk/QuickGO/term/GO:0060998), [GO:0061001](https://www.ebi.ac.uk/QuickGO/term/GO:0061001)). **Overall**, [TANC2](/details-gene/26115) shows highly significant and specific expression across a wide range of neuronal subtypes, with particularly high significance in various GABAergic cortical interneurons, such as [pvalb GABAergic cortical interneurons](/details-cell/CL4023018) and [VIP GABAergic cortical interneurons](/details-cell/CL4023016). Recent research has linked disruptive mutations in [TANC2](/details-gene/26115) to a defined neurodevelopmental syndrome often associated with psychiatric disorders, underscoring its critical role in human brain development and function [[Link](https://doi.org/10.1038/s41467-019-12435-8)]. ## Cellular Roles and Expression Landscape The expression profile of [TANC2](/details-gene/26115) firmly establishes it as a key gene in the central nervous system. **Overall**, its expression is most significant in a diverse array of inhibitory interneurons, including [pvalb](/details-cell/CL4023018) (CSI: 53.35), [VIP](/details-cell/CL4023016) (CSI: 51.38), [sst](/details-cell/CL4023017) (CSI: 50.96), [sncg](/details-cell/CL4023015) (CSI: 42.80), and [lamp5 GABAergic cortical interneurons](/details-cell/CL4023011) (CSI: 39.53). This suggests a fundamental role in the architecture and function of cortical inhibitory circuits. Beyond interneurons, [TANC2](/details-gene/26115) is also significantly expressed in several glutamatergic (excitatory) neuronal populations, such as [L2/3 intratelencephalic projecting glutamatergic neurons](/details-cell/CL4030059) (CSI: 29.29) and [L6b glutamatergic cortical neurons](/details-cell/CL4023038) (CSI: 22.13). The gene also shows notable significance in glial precursor cells, specifically [differentiation-committed oligodendrocyte precursors](/details-cell/CL4023059) (CSI: 38.05) and [oligodendrocyte precursor cells](/details-cell/CL0002453) (CSI: 34.61), which may indicate a role in oligodendrocyte development or myelination. Its localization within neurons is specific to the [axon](/details-cell/GO:0030424) and [dendritic spine](/details-cell/GO:0043197), consistent with a function at the synapse. The broad yet specific expression pattern across neuronal and glial precursor lineages highlights its importance in establishing and maintaining the complex cellular organization of the brain. ## Pathways and Molecular Function [TANC2](/details-gene/26115) is functionally annotated with roles critical to synaptic plasticity and neuronal communication. Its involvement in the regulation of [dendritic spine development](/details-cell/GO:0060998) and [morphogenesis](/details-cell/GO:0061001) is consistent with its high expression in cortical neurons, where spine dynamics are essential for learning and memory. Dendritic spines are the primary sites of excitatory synapses, and TANC2's role here suggests it is a key architectural component of the postsynaptic density. Furthermore, [TANC2](/details-gene/26115) is implicated in [dense core granule cytoskeletal transport](/details-cell/GO:0099519). This is directly supported by research demonstrating that TANC2 functions as a scaffold protein that recruits KIF1A-driven dense core vesicles to postsynaptic sites, a mechanism crucial for delivering neuropeptides and other signaling molecules [[Link](https://doi.org/10.1016/j.celrep.2018.06.071)]. This function, combined with its role in spine morphology, positions [TANC2](/details-gene/26115) as a key regulator of both the structural integrity and the molecular cargo delivery at synapses, impacting long-term synaptic function. ## Research Directions The association of [TANC2](/details-gene/26115) mutations with neurodevelopmental disorders provides a strong impetus for further investigation [[Link](https://doi.org/10.1038/s41467-019-12435-8)]. Understanding how haploinsufficiency of this synaptic scaffolding protein leads to complex cognitive and psychiatric phenotypes is a key research priority. **Proposed Hypotheses:** 1. Disruptive mutations in [TANC2](/details-gene/26115) may lead to an imbalance in cortical excitation/inhibition. Given its high expression and structural role in both GABAergic and glutamatergic neurons, loss of one functional copy could disproportionately affect the stability or function of inhibitory synapses, leading to the network hyperexcitability often implicated in epilepsy and autism spectrum disorders. 2. The significant expression of [TANC2](/details-gene/26115) in [oligodendrocyte precursor cells](/details-cell/CL0002453) suggests a previously uncharacterized role in myelination. It is hypothesized that [TANC2](/details-gene/26115) haploinsufficiency impairs the transport of proteins or lipids essential for oligodendrocyte maturation or myelin sheath formation, contributing to subtle white matter abnormalities and cognitive deficits in affected individuals. **Experimental Approach:** To test the first hypothesis, a robust experimental model would involve generating human induced pluripotent stem cells (iPSCs) from patients with [TANC2](/details-gene/26115) mutations and differentiating them into cortical organoids. By comparing these patient-derived organoids with isogenic, CRISPR-corrected controls, researchers could use multi-electrode array (MEA) recordings to assess network-level activity and quantify the excitation/inhibition balance. Furthermore, advanced imaging techniques like super-resolution microscopy could be used to analyze dendritic spine density and morphology on specific neuronal subtypes within the organoid, directly linking cellular pathology to network dysfunction. **Therapeutic Potential:** As the pathology associated with [TANC2](/details-gene/26115) is caused by loss-of-function mutations, it is not a suitable target for traditional small-molecule inhibition. Therapeutic strategies would likely need to focus on restoring protein function. This presents a significant challenge, but potential future avenues could include gene therapies aimed at delivering a functional copy of the [TANC2](/details-gene/26115) gene to affected neurons or developing small molecules that enhance the stability or function of the remaining TANC2 protein. Given its CNS-specific expression, such therapies could potentially achieve high specificity with limited off-target effects.

Genular Protein ID: 1142814771

Symbol: TANC2_HUMAN

Name: Protein TANC2

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 16625196

Title: DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage.

PubMed ID: 16625196

DOI: 10.1038/nature04689

PubMed ID: 10997877

Title: Prediction of the coding sequences of unidentified human genes. XVIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro.

PubMed ID: 10997877

DOI: 10.1093/dnares/7.4.271

PubMed ID: 14702039

Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.

PubMed ID: 14702039

DOI: 10.1038/ng1285

PubMed ID: 10574461

Title: Characterization of cDNA clones selected by the GeneMark analysis from size-fractionated cDNA libraries from human brain.

PubMed ID: 10574461

DOI: 10.1093/dnares/6.5.329

PubMed ID: 15144186

Title: Robust phosphoproteomic profiling of tyrosine phosphorylation sites from human T cells using immobilized metal affinity chromatography and tandem mass spectrometry.

PubMed ID: 15144186

DOI: 10.1021/ac035352d

PubMed ID: 17081983

Title: Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.

PubMed ID: 17081983

DOI: 10.1016/j.cell.2006.09.026

PubMed ID: 18220336

Title: Combining protein-based IMAC, peptide-based IMAC, and MudPIT for efficient phosphoproteomic analysis.

PubMed ID: 18220336

DOI: 10.1021/pr0705441

PubMed ID: 18669648

Title: A quantitative atlas of mitotic phosphorylation.

PubMed ID: 18669648

DOI: 10.1073/pnas.0805139105

PubMed ID: 19690332

Title: Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.

PubMed ID: 19690332

DOI: 10.1126/scisignal.2000007

PubMed ID: 20068231

Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.

PubMed ID: 20068231

DOI: 10.1126/scisignal.2000475

PubMed ID: 23186163

Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.

PubMed ID: 23186163

DOI: 10.1021/pr300630k

PubMed ID: 23033978

Title: Diagnostic exome sequencing in persons with severe intellectual disability.

PubMed ID: 23033978

DOI: 10.1056/nejmoa1206524

PubMed ID: 28493397

Title: A recurrent de novo mutation in ACTG1 causes isolated ocular coloboma.

PubMed ID: 28493397

DOI: 10.1002/humu.23246

PubMed ID: 30021165

Title: Regulation of KIF1A-Driven Dense Core Vesicle Transport: Ca2+/CaM Controls DCV Binding and Liprin-alpha/TANC2 Recruits DCVs to Postsynaptic Sites.

PubMed ID: 30021165

DOI: 10.1016/j.celrep.2018.06.071

PubMed ID: 31616000

Title: Disruptive mutations in TANC2 define a neurodevelopmental syndrome associated with psychiatric disorders.

PubMed ID: 31616000

DOI: 10.1038/s41467-019-12435-8

Sequence Information:

  • Length: 1990
  • Mass: 219650
  • Checksum: E835D98F5C546365
  • Sequence:
  • MFRNSLKMLL TGGKSSRKNR SSDGGSEEPP DRRQSSVDSR QSRSGQGGIS TESDCAFEPD 
    YAVPPLPVSE GDAEQELGPP PSVDEAANTL MTRLGFLLGE KVTEVQPGDQ YSMEVQDENQ 
    TSAITQRISP CSTLTSSTAS PPASSPCSTL PPISTNATAK DCSYGAVTSP TSTLESRDSG 
    IIATLTSYSE NVERTKYAGE SSKELGSGGN IKPWQSQKSS MDSCLYRVDE NMTASTYSLN 
    KIPERNLETV LSQSVQSIPL YLMPRPNSVA ATSSAHLEDL AYLDEQRHTP LRTSLRMPRQ 
    SMGGARTQQD LRVRFAPYRP PDISLKPLLF EVPSITTESV FVGRDWVFHE IDAQLQSSNA 
    SVNQGVVIVG NIGFGKTAII SRLVALSCHG TRMRQIASDS PHASPKHVDA NRELPLTQPP 
    SAHSSITSGS CPGTPEMRRR QEEAMRRLAS QVVAYHYCQA DNAYTCLVPE FVHNVAALLC 
    RSPQLTAYRE QLLREPHLQS MLSLRSCVQD PMASFRRGVL EPLENLHKER KIPDEDFIIL 
    IDGLNEAEFH KPDYGDTIVS FLSKMIGKFP SWLKLIVTVR TSLQEITKLL PFHRIFLDRL 
    EENEAIDQDL QAYILHRIHS SSEIQNNISL NGKMDNTTFG KLSSHLKTLS QGSYLYLKLT 
    FDLIEKGYLV LKSSSYKVVP VSLSEVYLLQ CNMKFPTQSS FDRVMPLLNV AVASLHPLTD 
    EHIFQAINAG SIEGTLEWED FQQRMENLSM FLIKRRDMTR MFVHPSFREW LIWREEGEKT 
    KFLCDPRSGH TLLAFWFSRQ EGKLNRQQTI ELGHHILKAH IFKGLSKKVG VSSSILQGLW 
    ISYSTEGLSM ALASLRNLYT PNIKVSRLLI LGGANINYRT EVLNNAPILC VQSHLGYTEM 
    VALLLEFGAN VDASSESGLT PLGYAAAAGY LSIVVLLCKK RAKVDHLDKN GQCALVHAAL 
    RGHLEVVKFL IQCDWTMAGQ QQGVFKKSHA IQQALIAAAS MGYTEIVSYL LDLPEKDEEE 
    VERAQINSFD SLWGETALTA AAGRGKLEVC RLLLEQGAAV AQPNRRGAVP LFSTVRQGHW 
    QIVDLLLTHG ADVNMADKQG RTPLMMAASE GHLGTVDFLL AQGASIALMD KEGLTALSWA 
    CLKGHLSVVR SLVDNGAATD HADKNGRTPL DLAAFYGDAE VVQFLVDHGA MIEHVDYSGM 
    RPLDRAVGCR NTSVVVTLLK KGAKIGPATW AMATSKPDIM IILLSKLMEE GDMFYKKGKV 
    KEAAQRYQYA LKKFPREGFG EDLKTFRELK VSLLLNLSRC RRKMNDFGMA EEFATKALEL 
    KPKSYEAYYA RARAKRSSRQ FAAALEDLNE AIKLCPNNRE IQRLLLRVEE ECRQMQQPQQ 
    PPPPPQPQQQ LPEEAEPEPQ HEDIYSVQDI FEEEYLEQDV ENVSIGLQTE ARPSQGLPVI 
    QSPPSSPPHR DSAYISSSPL GSHQVFDFRS SSSVGSPTRQ TYQSTSPALS PTHQNSHYRP 
    SPPHTSPAHQ GGSYRFSPPP VGGQGKEYPS PPPSPLRRGP QYRASPPAES MSVYRSQSGS 
    PVRYQQETSV SQLPGRPKSP LSKMAQRPYQ MPQLPVAVPQ QGLRLQPAKA QIVRSNQPSP 
    AVHSSTVIPT GAYGQVAHSM ASKYQSSQGD IGVSQSRLVY QGSIGGIVGD GRPVQHVQAS 
    LSAGAICQHG GLTKEDLPQR PSSAYRGGVR YSQTPQIGRS QSASYYPVCH SKLDLERSSS 
    QLGSPDVSHL IRRPISVNPN EIKPHPPTPR PLLHSQSVGL RFSPSSNSIS STSNLTPTFR 
    PSSSIQQMEI PLKPAYERSC DELSPVSPTQ GGYPSEPTRS RTTPFMGIID KTARTQQYPH 
    LHQQNRTWAV SSVDTVLSPT SPGNLPQPES FSPPSSISNI AFYNKTNNAQ NGHLLEDDYY 
    SPHGMLANGS RGDLLERVSQ ASSYPDVKVA RTLPVAQAYQ DNLYRQLSRD SRQGQTSPIK 
    PKRPFVESNV