Details for: ARPC5L

Gene ID: 81873

Gene Type:  Protein-coding  - A gene that serves as a template for producing a messenger RNA (mRNA) molecule, which is then translated into a functional protein.

Symbol: ARPC5L

Ensembl ID: ENSG00000136950

Description: actin related protein 2/3 complex subunit 5 like

Selected Context(s):  Overall

Cell Significance Landscape

Contexts:

Associated with

Significant Cells

Cell Significance Index (CSI) scores for the chosen context(s)

  • CD16-positive, CD56-dim natural killer cell, human CL0000939
    CSI 39.74
    rCSI 26.48%
    PRS 62.34
  • plasmablast CL0000980
    CSI 35.05
    rCSI 27.57%
    PRS 40.68
  • fallopian tube secretory epithelial cell CL4030006
    CSI 32.05
    rCSI 30.85%
    PRS 35.71
  • placental villous trophoblast CL2000060
    CSI 30.14
    rCSI 46.58%
    PRS 33.14
  • common dendritic progenitor CL0001029
    CSI 29.33
    rCSI 36.81%
    PRS 43.66
  • granulocyte monocyte progenitor cell CL0000557
    CSI 28.09
    rCSI 24.32%
    PRS 38.53
  • T follicular helper cell CL0002038
    CSI 22.67
    rCSI 16.97%
    PRS 48.95
  • CD16-negative, CD56-bright natural killer cell, human CL0000938
    CSI 21.57
    rCSI 16.18%
    PRS 69.35
  • retinal ganglion cell CL0000740
    CSI 18.49
    rCSI 40.84%
    PRS 25.66
  • vascular associated smooth muscle cell CL0000359
    CSI 16.06
    rCSI 52.11%
    PRS 38.72
  • nasal mucosa goblet cell CL0002480
    CSI 15.04
    rCSI 17.44%
    PRS 45.75
  • large pre-B-II cell CL0000957
    CSI 14.44
    rCSI 41.23%
    PRS 50.18
  • early lymphoid progenitor CL0000936
    CSI 14.21
    rCSI 12.48%
    PRS 39.56
  • CD4-positive, alpha-beta cytotoxic T cell CL0000934
    CSI 13.64
    rCSI 18.74%
    PRS 55.58
  • keratinocyte CL0000312
    CSI 13.42
    rCSI 11.25%
    PRS 39.83
  • paneth cell CL0000510
    CSI 13.41
    rCSI 19.8%
    PRS 51.24
  • pancreatic ductal cell CL0002079
    CSI 12.99
    rCSI 25.26%
    PRS 36.36
  • mammary gland epithelial cell CL0002327
    CSI 11.7
    rCSI 41.07%
    PRS 51.22
  • fraction A pre-pro B cell CL0002045
    CSI 11.18
    rCSI 12.8%
    PRS 58.01
  • duct epithelial cell CL0000068
    CSI 10.66
    rCSI 15.59%
    PRS 37.23
  • effector memory CD4-positive, alpha-beta T cell CL0000905
    CSI 10.12
    rCSI 13.79%
    PRS 63.56
  • astrocyte of the cerebral cortex CL0002605
    CSI 9.84
    rCSI 22.05%
    PRS 22.84
  • mesenchymal cell CL0008019
    CSI 9.82
    rCSI 24.94%
    PRS 32.7
  • ciliated cell CL0000064
    CSI 9.41
    rCSI 15.24%
    PRS 34.18
  • memory T cell CL0000813
    CSI 9.28
    rCSI 17.88%
    PRS 64.97
  • stem cell CL0000034
    CSI 8.96
    rCSI 8.64%
    PRS 27.03
  • natural T-regulatory cell CL0000903
    CSI 8.93
    rCSI 16.91%
    PRS 70.4
  • pancreatic acinar cell CL0002064
    CSI 8.76
    rCSI 11.64%
    PRS 38.55
  • foveolar cell of stomach CL0002179
    CSI 8.49
    rCSI 18.08%
    PRS 49.82
  • myofibroblast cell CL0000186
    CSI 8.48
    rCSI 11.75%
    PRS 41.51
  • activated type II NK T cell CL0000931
    CSI 8.48
    rCSI 9.55%
    PRS 50.43
  • intestinal epithelial cell CL0002563
    CSI 8.18
    rCSI 8.55%
    PRS 35.18
  • lung macrophage CL1001603
    CSI 7.82
    rCSI 17.47%
    PRS 40.59
  • endothelial cell of lymphatic vessel CL0002138
    CSI 7.63
    rCSI 15.12%
    PRS 62.63
  • pulmonary capillary endothelial cell CL4028001
    CSI 7.18
    rCSI 13.7%
    PRS 51.22
  • endothelial cell of placenta CL0009092
    CSI 7.14
    rCSI 35.21%
    PRS 45.34
  • multi-ciliated epithelial cell CL0005012
    CSI 6.94
    rCSI 6.92%
    PRS 30.09
  • neural progenitor cell CL0011020
    CSI 6.9
    rCSI 30.37%
    PRS 30.23
  • extravillous trophoblast CL0008036
    CSI 6.87
    rCSI 8.5%
    PRS 31.31
  • common myeloid progenitor CL0000049
    CSI 6.61
    rCSI 5.34%
    PRS 35.36
  • intestine goblet cell CL0019031
    CSI 6.61
    rCSI 5.86%
    PRS 34.5
  • secretory cell CL0000151
    CSI 6.49
    rCSI 6.78%
    PRS 35.51
  • deuterosomal cell CL4033044
    CSI 6.29
    rCSI 21.25%
    PRS 46.24
  • germinal center B cell CL0000844
    CSI 6.26
    rCSI 18.67%
    PRS 59.48
  • ciliated epithelial cell CL0000067
    CSI 6.18
    rCSI 5.43%
    PRS 26.05
  • CD14-positive monocyte CL0001054
    CSI 5.98
    rCSI 7.45%
    PRS 45.82
  • blood vessel endothelial cell CL0000071
    CSI 5.88
    rCSI 12.2%
    PRS 33.94
  • activated CD4-positive, alpha-beta T cell CL0000896
    CSI 5.85
    rCSI 5.41%
    PRS 54.89
  • transit amplifying cell of colon CL0009011
    CSI 5.77
    rCSI 6.78%
    PRS 38.65
  • basal cell of prostate epithelium CL0002341
    CSI 5.75
    rCSI 16.64%
    PRS 56.02
  • mature NK T cell CL0000814
    CSI 5.47
    rCSI 7%
    PRS 72.3
  • lung neuroendocrine cell CL1000223
    CSI 5.38
    rCSI 7.95%
    PRS 39.3
  • plasma cell CL0000786
    CSI 5.35
    rCSI 7.01%
    PRS 75.72
  • neuroblast (sensu Vertebrata) CL0000031
    CSI 5.28
    rCSI 6.78%
    PRS 33.39
  • goblet cell CL0000160
    CSI 5.25
    rCSI 4.96%
    PRS 36.12
  • central memory CD4-positive, alpha-beta T cell CL0000904
    CSI 5.09
    rCSI 3.01%
    PRS 47.98
  • centrilobular region hepatocyte CL0019029
    CSI 5
    rCSI 13.06%
    PRS 45.27
  • CD14-positive, CD16-positive monocyte CL0002397
    CSI 4.92
    rCSI 6.44%
    PRS 47.23
  • plasmacytoid dendritic cell, human CL0001058
    CSI 4.9
    rCSI 3.42%
    PRS 36.73
  • squamous epithelial cell CL0000076
    CSI 4.78
    rCSI 11.34%
    PRS 40.74
  • group 3 innate lymphoid cell CL0001071
    CSI 4.75
    rCSI 3.57%
    PRS 37.6
  • pancreatic D cell CL0000173
    CSI 4.58
    rCSI 4.5%
    PRS 37.13
  • basal cell of epidermis CL0002187
    CSI 4.57
    rCSI 8.1%
    PRS 23.23
  • enterocyte CL0000584
    CSI 4.52
    rCSI 7.28%
    PRS 45.36
  • alveolar adventitial fibroblast CL4028006
    CSI 4.46
    rCSI 7.05%
    PRS 35.59
  • CD4-positive, alpha-beta memory T cell CL0000897
    CSI 4.36
    rCSI 3.13%
    PRS 46.39
  • pro-B cell CL0000826
    CSI 4.34
    rCSI 3.59%
    PRS 35.64
  • tracheobronchial serous cell CL0019001
    CSI 4.19
    rCSI 18.08%
    PRS 52.16
  • conventional dendritic cell CL0000990
    CSI 4.18
    rCSI 3.49%
    PRS 60.26
  • double-positive, alpha-beta thymocyte CL0000809
    CSI 4.14
    rCSI 4.22%
    PRS 46.81
  • colon epithelial cell CL0011108
    CSI 4.09
    rCSI 4.29%
    PRS 32.65
  • syncytiotrophoblast cell CL0000525
    CSI 4.03
    rCSI 11.6%
    PRS 53.47
  • myeloid leukocyte CL0000766
    CSI 3.9
    rCSI 3.6%
    PRS 36.08
  • endothelial cell of periportal hepatic sinusoid CL0019021
    CSI 3.89
    rCSI 17.85%
    PRS 57.55
  • pulmonary alveolar type 2 cell CL0002063
    CSI 3.86
    rCSI 5.99%
    PRS 45.53
  • epithelial cell of lower respiratory tract CL0002632
    CSI 3.84
    rCSI 2.98%
    PRS 34.62
  • naive T cell CL0000898
    CSI 3.76
    rCSI 2.61%
    PRS 46.64
  • precursor B cell CL0000817
    CSI 3.72
    rCSI 3.26%
    PRS 44.19
  • unswitched memory B cell CL0000970
    CSI 3.68
    rCSI 3.09%
    PRS 51.21
  • megakaryocyte CL0000556
    CSI 3.67
    rCSI 15.94%
    PRS 51.55
  • effector CD4-positive, alpha-beta T cell CL0001044
    CSI 3.61
    rCSI 10.35%
    PRS 50.67
  • enteroendocrine cell CL0000164
    CSI 3.61
    rCSI 4.93%
    PRS 37.68
  • memory B cell CL0000787
    CSI 3.54
    rCSI 3.5%
    PRS 73.38
  • innate lymphoid cell CL0001065
    CSI 3.5
    rCSI 7.22%
    PRS 43.69
  • mucus secreting cell CL0000319
    CSI 3.49
    rCSI 5.55%
    PRS 44.02
  • CD4-positive, alpha-beta thymocyte CL0000810
    CSI 3.42
    rCSI 2.74%
    PRS 55.61
  • CD1c-positive myeloid dendritic cell CL0002399
    CSI 3.41
    rCSI 4.12%
    PRS 41.53
  • mononuclear phagocyte CL0000113
    CSI 3.41
    rCSI 7.51%
    PRS 38.86
  • immature B cell CL0000816
    CSI 3.35
    rCSI 2.49%
    PRS 47.32
  • fibroblast of lung CL0002553
    CSI 3.35
    rCSI 3.11%
    PRS 34.74
  • cerebral cortex GABAergic interneuron CL0010011
    CSI 3.24
    rCSI 9.57%
    PRS 39.44
  • epithelial cell of esophagus CL0002252
    CSI 3.24
    rCSI 32%
    PRS 66.18
  • CD8-positive, alpha-beta memory T cell CL0000909
    CSI 3.18
    rCSI 3.32%
    PRS 68.06
  • pancreatic A cell CL0000171
    CSI 3.11
    rCSI 3.25%
    PRS 36.99
  • prostate gland microvascular endothelial cell CL2000059
    CSI 3.09
    rCSI 73.99%
    PRS 66.18
  • retinal blood vessel endothelial cell CL0002585
    CSI 3.06
    rCSI 4.88%
    PRS 37.96
  • corticothalamic-projecting glutamatergic cortical neuron CL4023013
    CSI 3.05
    rCSI 17.98%
    PRS 23.43
  • pancreatic stellate cell CL0002410
    CSI 3.05
    rCSI 17.72%
    PRS 46.47
  • CD8-positive, alpha-beta cytotoxic T cell CL0000794
    CSI 3.02
    rCSI 3.6%
    PRS 54.14
  • vein endothelial cell of respiratory system CL4033008
    CSI 2.97
    rCSI 20.38%
    PRS 55.1
  • Merkel cell CL0000242
    CSI 0.1
    rCSI 2.1%
    PRS 90.2%
  • acinar cell of salivary gland CL0002623
    CSI 0.2
    rCSI 3.7%
    PRS 57.8%
  • hair follicular keratinocyte CL2000092
    CSI 0.2
    rCSI 3.7%
    PRS 74.4%
  • cytotoxic T cell CL0000910
    CSI 0.2
    rCSI 1.3%
    PRS 47.3%
  • Cajal-Retzius cell CL0000695
    CSI 0.3
    rCSI 1.9%
    PRS 54.0%
  • enterocyte of epithelium of small intestine CL1000334
    CSI 0.3
    rCSI 4.1%
    PRS 63.6%
  • lymphoid lineage restricted progenitor cell CL0000838
    CSI 0.3
    rCSI 1.2%
    PRS 54.1%
  • lung microvascular endothelial cell CL2000016
    CSI 0.3
    rCSI 5.8%
    PRS 64.3%
  • B-1 B cell CL0000819
    CSI 0.3
    rCSI 8.1%
    PRS 80.4%
  • L6b glutamatergic cortical neuron CL4023038
    CSI 0.3
    rCSI 1.0%
    PRS 23.3%
  • decidual natural killer cell, human CL0002343
    CSI 0.3
    rCSI 3.4%
    PRS 81.1%
  • pancreatic PP cell CL0002275
    CSI 0.3
    rCSI 1.3%
    PRS 50.9%
  • group 2 innate lymphoid cell CL0001069
    CSI 0.4
    rCSI 1.9%
    PRS 73.6%
  • intestinal crypt stem cell of colon CL0009043
    CSI 0.4
    rCSI 2.9%
    PRS 55.4%
  • paneth cell of colon CL0009009
    CSI 0.4
    rCSI 3.9%
    PRS 63.4%
  • mature alpha-beta T cell CL0000791
    CSI 0.4
    rCSI 1.5%
    PRS 53.2%
  • helper T cell CL0000912
    CSI 0.4
    rCSI 0.6%
    PRS 44.7%
  • primitive red blood cell CL0002355
    CSI 0.5
    rCSI 2.4%
    PRS 50.0%
  • luminal cell of prostate epithelium CL0002340
    CSI 0.5
    rCSI 2.7%
    PRS 51.4%
  • elicited macrophage CL0000861
    CSI 0.5
    rCSI 0.5%
    PRS 41.2%
  • hepatic pit cell CL2000054
    CSI 0.6
    rCSI 7.7%
    PRS 79.0%
  • colon goblet cell CL0009039
    CSI 0.6
    rCSI 1.4%
    PRS 47.4%
  • chandelier pvalb GABAergic cortical interneuron CL4023036
    CSI 0.6
    rCSI 1.8%
    PRS 25.2%
  • type EC enteroendocrine cell CL0000577
    CSI 0.6
    rCSI 2.1%
    PRS 49.1%
  • retinal cone cell CL0000573
    CSI 0.6
    rCSI 1.0%
    PRS 27.4%
  • type B pancreatic cell CL0000169
    CSI 0.7
    rCSI 1.5%
    PRS 32.4%
  • small intestine goblet cell CL1000495
    CSI 0.7
    rCSI 1.5%
    PRS 44.7%
  • bronchial goblet cell CL1000312
    CSI 0.7
    rCSI 2.8%
    PRS 57.3%
  • basal cell of epithelium of trachea CL1000348
    CSI 0.7
    rCSI 5.2%
    PRS 63.1%
  • respiratory goblet cell CL0002370
    CSI 0.7
    rCSI 8.0%
    PRS 56.1%
  • lamp5 GABAergic cortical interneuron CL4023011
    CSI 0.7
    rCSI 1.2%
    PRS 22.3%
  • respiratory epithelial cell CL0002368
    CSI 0.7
    rCSI 4.6%
    PRS 72.4%
  • vasa recta descending limb cell CL1001285
    CSI 0.7
    rCSI 5.9%
    PRS 71.7%
  • myeloid lineage restricted progenitor cell CL0000839
    CSI 0.8
    rCSI 3.9%
    PRS 58.5%
  • erythroid progenitor cell CL0000038
    CSI 0.8
    rCSI 4.4%
    PRS 46.1%
  • intestinal crypt stem cell of small intestine CL0009017
    CSI 0.9
    rCSI 2.3%
    PRS 43.6%
  • small pre-B-II cell CL0000954
    CSI 0.9
    rCSI 0.8%
    PRS 59.2%
  • pre-conventional dendritic cell CL0002010
    CSI 0.9
    rCSI 12.0%
    PRS 70.2%
  • dendritic cell, human CL0001056
    CSI 1.0
    rCSI 1.5%
    PRS 41.0%
  • sncg GABAergic cortical interneuron CL4023015
    CSI 1.0
    rCSI 1.6%
    PRS 24.2%
  • CD8-positive, CD28-negative, alpha-beta regulatory T cell CL0000920
    CSI 1.0
    rCSI 2.0%
    PRS 52.4%
  • intermediate monocyte CL0002393
    CSI 1.0
    rCSI 1.5%
    PRS 36.2%
  • neuroendocrine cell CL0000165
    CSI 1.0
    rCSI 3.9%
    PRS 55.3%
  • alternatively activated macrophage CL0000890
    CSI 1.1
    rCSI 1.3%
    PRS 48.2%
  • retina horizontal cell CL0000745
    CSI 1.1
    rCSI 1.7%
    PRS 32.5%
  • periportal region hepatocyte CL0019026
    CSI 1.2
    rCSI 4.5%
    PRS 44.6%
  • respiratory hillock cell CL4030023
    CSI 1.2
    rCSI 2.1%
    PRS 51.3%
  • glandular epithelial cell CL0000150
    CSI 1.2
    rCSI 3.2%
    PRS 58.1%
  • pulmonary ionocyte CL0017000
    CSI 1.2
    rCSI 1.5%
    PRS 41.9%
  • colonocyte CL1000347
    CSI 1.2
    rCSI 1.8%
    PRS 42.9%
  • mesodermal cell CL0000222
    CSI 1.3
    rCSI 1.5%
    PRS 33.6%
  • muscle cell CL0000187
    CSI 1.3
    rCSI 2.6%
    PRS 57.9%
  • podocyte CL0000653
    CSI 1.3
    rCSI 5.6%
    PRS 33.6%
  • lung endothelial cell CL1001567
    CSI 1.3
    rCSI 3.0%
    PRS 62.6%
  • near-projecting glutamatergic cortical neuron CL4023012
    CSI 1.3
    rCSI 4.9%
    PRS 23.1%
  • common lymphoid progenitor CL0000051
    CSI 1.3
    rCSI 1.8%
    PRS 57.3%
  • Hofbauer cell CL3000001
    CSI 1.3
    rCSI 2.5%
    PRS 43.8%
  • granulocyte CL0000094
    CSI 1.3
    rCSI 2.0%
    PRS 43.3%
  • CD8-alpha-alpha-positive, alpha-beta intraepithelial T cell CL0000915
    CSI 1.3
    rCSI 6.1%
    PRS 73.3%
  • transit amplifying cell of small intestine CL0009012
    CSI 1.4
    rCSI 6.0%
    PRS 55.0%
  • intestinal tuft cell CL0019032
    CSI 1.4
    rCSI 2.1%
    PRS 39.2%
  • activated CD8-positive, alpha-beta T cell, human CL0001049
    CSI 1.4
    rCSI 2.4%
    PRS 55.8%
  • endothelial cell of vascular tree CL0002139
    CSI 1.4
    rCSI 7.8%
    PRS 41.8%
  • endothelial cell of uterus CL0009095
    CSI 1.4
    rCSI 10.5%
    PRS 64.7%
  • class switched memory B cell CL0000972
    CSI 1.5
    rCSI 1.1%
    PRS 52.9%
  • bronchus fibroblast of lung CL2000093
    CSI 1.5
    rCSI 1.2%
    PRS 35.8%
  • ciliated columnar cell of tracheobronchial tree CL0002145
    CSI 1.5
    rCSI 3.4%
    PRS 34.4%
  • erythrocyte CL0000232
    CSI 1.5
    rCSI 3.4%
    PRS 41.1%
  • mucous neck cell CL0000651
    CSI 1.5
    rCSI 2.2%
    PRS 48.7%
  • M cell of gut CL0000682
    CSI 1.6
    rCSI 1.7%
    PRS 50.8%
  • CD8-positive, alpha-beta thymocyte CL0000811
    CSI 1.6
    rCSI 2.5%
    PRS 62.0%
  • acinar cell CL0000622
    CSI 1.6
    rCSI 2.4%
    PRS 44.8%
  • intraepithelial lymphocyte CL0002496
    CSI 1.6
    rCSI 4.4%
    PRS 77.0%
  • corneal epithelial cell CL0000575
    CSI 1.6
    rCSI 4.7%
    PRS 53.0%
  • exhausted T cell CL0011025
    CSI 1.7
    rCSI 27.9%
    PRS 71.6%
  • VIP GABAergic cortical interneuron CL4023016
    CSI 1.7
    rCSI 2.0%
    PRS 22.2%
  • transit amplifying cell CL0009010
    CSI 1.7
    rCSI 2.6%
    PRS 51.2%
  • microcirculation associated smooth muscle cell CL0008035
    CSI 1.7
    rCSI 4.8%
    PRS 37.8%
  • IgG plasma cell CL0000985
    CSI 1.7
    rCSI 2.0%
    PRS 53.7%
  • pluripotent stem cell CL0002248
    CSI 1.7
    rCSI 50.7%
    PRS 60.5%
  • T-helper 17 cell CL0000899
    CSI 1.7
    rCSI 1.4%
    PRS 55.8%
  • kidney epithelial cell CL0002518
    CSI 1.7
    rCSI 3.3%
    PRS 58.8%
  • enteric smooth muscle cell CL0002504
    CSI 1.7
    rCSI 2.5%
    PRS 37.6%
  • neural crest cell CL0011012
    CSI 1.7
    rCSI 1.4%
    PRS 24.8%
  • lung ciliated cell CL1000271
    CSI 1.7
    rCSI 2.0%
    PRS 26.7%
  • pancreatic epsilon cell CL0005019
    CSI 1.7
    rCSI 8.1%
    PRS 59.7%
  • effector memory CD8-positive, alpha-beta T cell, terminally differentiated CL0001062
    CSI 1.7
    rCSI 8.7%
    PRS 44.7%
  • rod bipolar cell CL0000751
    CSI 1.8
    rCSI 3.2%
    PRS 29.6%
  • paneth cell of epithelium of small intestine CL1000343
    CSI 1.8
    rCSI 5.0%
    PRS 49.8%
  • epithelial cell of lung CL0000082
    CSI 1.8
    rCSI 1.5%
    PRS 33.4%
  • effector memory CD8-positive, alpha-beta T cell CL0000913
    CSI 1.8
    rCSI 1.7%
    PRS 49.4%
  • sst GABAergic cortical interneuron CL4023017
    CSI 1.8
    rCSI 2.4%
    PRS 23.1%
  • type L enteroendocrine cell CL0002279
    CSI 1.9
    rCSI 3.5%
    PRS 55.8%
  • mature T cell CL0002419
    CSI 1.9
    rCSI 1.5%
    PRS 49.9%
  • tracheobronchial smooth muscle cell CL0019019
    CSI 1.9
    rCSI 3.3%
    PRS 43.3%
  • IgM plasma cell CL0000986
    CSI 1.9
    rCSI 8.5%
    PRS 80.6%
  • respiratory suprabasal cell CL4033048
    CSI 1.9
    rCSI 2.5%
    PRS 39.4%
  • ON-bipolar cell CL0000749
    CSI 1.9
    rCSI 2.9%
    PRS 38.3%
  • skin fibroblast CL0002620
    CSI 2.0
    rCSI 1.7%
    PRS 44.8%
  • regulatory T cell CL0000815
    CSI 2.0
    rCSI 2.3%
    PRS 61.7%

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Network Configuration

Explore relationships of the current gene. Select an Interaction Source: 'ONTOLOGY' for shared pathways (GO/Reactome) or 'STRING' for protein-protein interactions. Further refine by selecting context genes and comparing Cell Significance Index (CSI) scores between baseline and target cell types and their specific contexts.

Comma-separated if multiple.
Comma-separated if multiple.

Legend:
  • Query Gene
  • Node Color (Target Cell CSI, relative to current network):
    • Very High
    • High
    • Medium
    • Low
    • Very Low
    • CSI N/A
  • Node Size: Proportional to Target Cell CSI magnitude
  • STRING PPI Edge
  • Shared Pathway Edge (ONTOLOGY)

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Other Information

This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.

## Summary [ARPC5L](/details-gene/81873), or Actin Related Protein 2/3 Complex Subunit 5 Like, is a protein-coding gene located on chromosome 9q33.3. It encodes a subunit of the Arp2/3 complex, a central molecular machine responsible for the nucleation of actin filaments. This function is fundamental to the regulation of the actin cytoskeleton, which is critical for cell shape, motility, and division. The expression profile of [ARPC5L](/details-gene/81873) reflects its core function, showing high significance in a diverse array of cell types that require dynamic cytoskeletal remodeling. **Overall**, it is a key marker in highly motile immune cells such as [CD16-positive, CD56-dim natural killer cell, human](/details-cell/CL0000939), differentiating antibody-producing cells like [plasmablast](/details-cell/CL0000980), and various hematopoietic progenitor cells, suggesting a crucial role in immune cell trafficking, development, and function. ## Cellular Roles and Expression Landscape The expression landscape of [ARPC5L](/details-gene/81873) highlights its importance in cells defined by high motility, structural plasticity, or active proliferation. **Overall**, the gene shows the highest significance in the hematopoietic and immune systems. It is a top marker for cytotoxic immune effectors like [CD16-positive, CD56-dim natural killer cell, human](/details-cell/CL0000939), as well as developing immune cells including [plasmablast](/details-cell/CL0000980), [T follicular helper cell](/details-cell/CL0002038), and several progenitor populations such as [common dendritic progenitor](/details-cell/CL0001029) and [granulocyte monocyte progenitor cell](/details-cell/CL0000557). This pattern strongly suggests that [ARPC5L](/details-gene/81873)-driven actin dynamics are essential for immune cell development, migration, and the execution of effector functions. Beyond the immune system, [ARPC5L](/details-gene/81873) is also significantly expressed in specialized epithelial and structural cells. Its high significance in [fallopian tube secretory epithelial cell](/details-cell/CL4030006), [placental villous trophoblast](/details-cell/CL2000060), and [nasal mucosa goblet cell](/details-cell/CL0002480) indicates a role in maintaining the complex morphology of secretory tissues or in the process of exocytosis. Furthermore, its expression in [vascular associated smooth muscle cell](/details-cell/CL0000359) and [keratinocyte](/details-cell/CL0000312) points to a broader role in tissue structure, contraction, and barrier function. The presence in [retinal ganglion cell](/details-cell/CL0000740) also suggests a potential function in neuronal processes, such as axon guidance or synaptic plasticity, which are dependent on cytoskeletal remodeling. ## Pathways and Molecular Function The function of [ARPC5L](/details-gene/81873) is intrinsically tied to its role as a component of the [Arp2/3 protein complex](/details-go/GO:0005885), a seven-protein assembly located in the [cytoplasm](/details-go/GO:0005737) and at sites of dynamic actin turnover like [focal adhesion](/details-go/GO:0005925) points. Gene Ontology annotations confirm its direct involvement in [Arp2/3 complex-mediated actin nucleation](/details-go/GO:0034314), the process of creating new actin filaments from existing ones. This molecular activity is a rate-limiting step for the [regulation of actin filament polymerization](/details-go/GO:0030833). Functionally, this role in actin nucleation underpins higher-order biological processes. The most prominent of these is [cell migration](/details-go/GO:0016477), which is consistent with the gene's high expression in migratory immune cells and progenitor cells. The protein's ability to bind to actin filaments ([actin filament binding](/details-go/GO:0051015)) and other proteins ([protein binding](/details-go/GO:0005515)) enables its integration into the complex signaling networks that control cytoskeletal dynamics in response to extracellular cues. Its identification in the [extracellular exosome](/details-go/GO:0070062) suggests it may also be involved in intercellular communication or the shedding of cellular components. The initial characterization of the gene was part of large-scale sequencing efforts of the human genome [Link](https://doi.org/10.1038/nature02465) and full-length cDNAs [Link](https://doi.org/10.1038/ng1285). ## Research Directions The widespread yet specific expression pattern of [ARPC5L](/details-gene/81873) suggests several avenues for future research, particularly concerning its role in cell-type-specific functions beyond general cytoskeletal maintenance. **Testable Hypotheses:** 1. Given its high significance in multiple hematopoietic progenitor populations ([common dendritic progenitor](/details-cell/CL0001029), [granulocyte monocyte progenitor cell](/details-cell/CL0000557), [early lymphoid progenitor](/details-cell/CL0000936)), [ARPC5L](/details-gene/81873) may be a critical regulator of hematopoietic stem cell trafficking and lineage commitment. Its depletion could impair the ability of progenitors to migrate to appropriate developmental niches or respond to differentiation signals. 2. The high expression of [ARPC5L](/details-gene/81873) in specialized secretory cells, such as [fallopian tube secretory epithelial cell](/details-cell/CL4030006) and [nasal mucosa goblet cell](/details-cell/CL0002480), suggests a specialized role in vesicle transport and exocytosis. It may be required for the formation of an actin meshwork that either facilitates or restricts the movement of secretory vesicles to the plasma membrane. 3. The significant expression in [retinal ganglion cell](/details-cell/CL0000740) points to a role for [ARPC5L](/details-gene/81873) in neuronal development or function. It may be essential for growth cone motility during axon guidance or for the structural plasticity of dendritic spines at the [glutamatergic synapse](/details-go/GO:0098978). **Proposed Experimental Approach:** To test hypothesis #2, one could utilize an *in vitro* organoid model derived from human fallopian tube epithelial cells. CRISPR-Cas9-mediated knockout of [ARPC5L](/details-gene/81873) could be performed in these organoids. The functional consequences would be assessed by comparing knockout and wild-type organoids. Changes in secretory function could be quantified by measuring the concentration of key secreted proteins (e.g., OVGP1) in the culture supernatant via ELISA. Simultaneously, live-cell imaging of fluorescently-tagged vesicles would reveal defects in intracellular transport, while super-resolution microscopy could be used to analyze the structure of the sub-membrane actin cortex. **Therapeutic Potential:** As a core component of the essential Arp2/3 complex, [ARPC5L](/details-gene/81873) is a challenging therapeutic target for systemic administration due to the high likelihood of toxicity in healthy, proliferating tissues. However, in pathologies characterized by aberrant cell migration, such as cancer metastasis or chronic inflammation, **inhibition** of the Arp2/3 complex pathway is a viable strategy. While [ARPC5L](/details-gene/81873) itself may not be the primary drug target, its high expression could serve as a biomarker indicating a cell's dependency on Arp2/3-mediated motility. Localized or targeted delivery of Arp2/3 complex inhibitors to disease sites could offer a therapeutic window, disrupting pathological cell migration while minimizing systemic side effects.

Genular Protein ID: 795438400

Symbol: ARP5L_HUMAN

Name: Actin-related protein 2/3 complex subunit 5-like protein

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 15164053

Title: DNA sequence and analysis of human chromosome 9.

PubMed ID: 15164053

DOI: 10.1038/nature02465

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 17081983

Title: Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.

PubMed ID: 17081983

DOI: 10.1016/j.cell.2006.09.026

PubMed ID: 20068231

Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.

PubMed ID: 20068231

DOI: 10.1126/scisignal.2000475

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 23186163

Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.

PubMed ID: 23186163

DOI: 10.1021/pr300630k

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

PubMed ID: 25944712

Title: N-terminome analysis of the human mitochondrial proteome.

PubMed ID: 25944712

DOI: 10.1002/pmic.201400617

Sequence Information:

  • Length: 153
  • Mass: 16941
  • Checksum: D8E4772404300560
  • Sequence:
  • MARNTLSSRF RRVDIDEFDE NKFVDEQEEA AAAAAEPGPD PSEVDGLLRQ GDMLRAFHAA 
    LRNSPVNTKN QAVKERAQGV VLKVLTNFKS SEIEQAVQSL DRNGVDLLMK YIYKGFEKPT 
    ENSSAVLLQW HEKALAVGGL GSIIRVLTAR KTV

Genular Protein ID: 3111543702

Symbol: B3KPC7_HUMAN

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 14702039

Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.

PubMed ID: 14702039

DOI: 10.1038/ng1285

Sequence Information:

  • Length: 153
  • Mass: 16971
  • Checksum: D8A5702473377517
  • Sequence:
  • MARNTLSSRF RRVDIDEFDE NKFVDEQEEA AAAAAEPGPD PSEVDGLLRQ GDMLWAFHAA 
    LRNSPVNTKN QAVKERAQGV VLKVLTNFKS SEIEQAVQSL DRNGVDLLMK YIYKGFEKPT 
    ENSSAVLLQW HEKALAVGGL GSIIRVLTAR KTV