Details for: DNPH1

Gene ID: 10591

Gene Type:  Protein-coding  - A gene that serves as a template for producing a messenger RNA (mRNA) molecule, which is then translated into a functional protein.

Symbol: DNPH1

Ensembl ID: ENSG00000112667

Description: 2'-deoxynucleoside 5'-phosphate N-hydrolase 1

Cell Significance Landscape

Associated with

Significant Cells

Cell Significance Index (CSI) scores for the chosen context(s)

  • ciliated epithelial cell CL0000067
    CSI 63.7
    rCSI 56.01%
    PRS 63.34
  • intestinal epithelial cell CL0002563
    CSI 55.04
    rCSI 57.52%
    PRS 72.67
  • stem cell CL0000034
    CSI 51.77
    rCSI 49.91%
    PRS 67.29
  • multi-ciliated epithelial cell CL0005012
    CSI 46.47
    rCSI 46.37%
    PRS 68.51
  • transit amplifying cell of colon CL0009011
    CSI 46.18
    rCSI 54.23%
    PRS 76.88
  • megakaryocyte-erythroid progenitor cell CL0000050
    CSI 37.02
    rCSI 33.43%
    PRS 72.67
  • lung ciliated cell CL1000271
    CSI 36.75
    rCSI 42.5%
    PRS 66.52
  • intestine goblet cell CL0019031
    CSI 33.01
    rCSI 29.3%
    PRS 72.79
  • enterocyte CL0000584
    CSI 32.25
    rCSI 52%
    PRS 75.13
  • colonocyte CL1000347
    CSI 32
    rCSI 45.87%
    PRS 76.61
  • fallopian tube secretory epithelial cell CL4030006
    CSI 31.06
    rCSI 29.89%
    PRS 74.24
  • secretory cell CL0000151
    CSI 28.71
    rCSI 29.96%
    PRS 74.58
  • colon epithelial cell CL0011108
    CSI 28.27
    rCSI 29.62%
    PRS 72.08
  • epithelial cell of proximal tubule CL0002306
    CSI 27.17
    rCSI 66.36%
    PRS 67.67
  • transit amplifying cell CL0009010
    CSI 25.13
    rCSI 38.43%
    PRS 84.69
  • ciliated columnar cell of tracheobronchial tree CL0002145
    CSI 24.55
    rCSI 55.97%
    PRS 69.36
  • myeloid leukocyte CL0000766
    CSI 24.14
    rCSI 22.27%
    PRS 76.55
  • M cell of gut CL0000682
    CSI 22.34
    rCSI 23.74%
    PRS 81.4
  • mucous neck cell CL0000651
    CSI 21.32
    rCSI 30.73%
    PRS 83.05
  • common myeloid progenitor CL0000049
    CSI 20.68
    rCSI 16.72%
    PRS 77.15
  • ciliated cell CL0000064
    CSI 19.44
    rCSI 31.5%
    PRS 70.31
  • deuterosomal cell CL4033044
    CSI 18.95
    rCSI 64.06%
    PRS 74.49
  • naive T cell CL0000898
    CSI 17.41
    rCSI 12.11%
    PRS 88.98
  • pancreatic A cell CL0000171
    CSI 17.36
    rCSI 18.19%
    PRS 78.19
  • pancreatic ductal cell CL0002079
    CSI 17.25
    rCSI 33.55%
    PRS 78.02
  • T follicular helper cell CL0002038
    CSI 16.73
    rCSI 12.52%
    PRS 88.09
  • alveolar adventitial fibroblast CL4028006
    CSI 15.49
    rCSI 24.46%
    PRS 76.71
  • mononuclear phagocyte CL0000113
    CSI 15.41
    rCSI 33.93%
    PRS 79.06
  • activated CD4-positive, alpha-beta T cell CL0000896
    CSI 15.39
    rCSI 14.23%
    PRS 90.21
  • promyelocyte CL0000836
    CSI 14.09
    rCSI 20.32%
    PRS 81.95
  • foveolar cell of stomach CL0002179
    CSI 13.67
    rCSI 29.11%
    PRS 82.42
  • activated CD8-positive, alpha-beta T cell, human CL0001049
    CSI 13.54
    rCSI 23.16%
    PRS 89.19
  • nasal mucosa goblet cell CL0002480
    CSI 13.23
    rCSI 15.34%
    PRS 79.85
  • kidney loop of Henle thin descending limb epithelial cell CL1001111
    CSI 12.97
    rCSI 18.38%
    PRS 71.22
  • epithelial cell CL0000066
    CSI 12.06
    rCSI 18.54%
    PRS 65.79
  • pulmonary alveolar type 2 cell CL0002063
    CSI 11.99
    rCSI 18.6%
    PRS 79.94
  • IgA plasma cell CL0000987
    CSI 11.58
    rCSI 11.85%
    PRS 84.55
  • intestinal crypt stem cell of small intestine CL0009017
    CSI 11.56
    rCSI 31.17%
    PRS 80.64
  • goblet cell CL0000160
    CSI 11.55
    rCSI 10.92%
    PRS 74.1
  • transit amplifying cell of small intestine CL0009012
    CSI 11.34
    rCSI 49.8%
    PRS 84.81
  • memory B cell CL0000787
    CSI 11.06
    rCSI 10.92%
    PRS 89.78
  • double-positive, alpha-beta thymocyte CL0000809
    CSI 10.94
    rCSI 11.15%
    PRS 85.65
  • plasmacytoid dendritic cell, human CL0001058
    CSI 10.92
    rCSI 7.63%
    PRS 78.28
  • granulocyte monocyte progenitor cell CL0000557
    CSI 10.64
    rCSI 9.21%
    PRS 79.4
  • duct epithelial cell CL0000068
    CSI 10.63
    rCSI 15.55%
    PRS 79.86
  • myofibroblast cell CL0000186
    CSI 10.6
    rCSI 14.68%
    PRS 73.16
  • plasmablast CL0000980
    CSI 10.24
    rCSI 8.06%
    PRS 80.94
  • megakaryocyte CL0000556
    CSI 10.05
    rCSI 43.59%
    PRS 82.22
  • erythrocyte CL0000232
    CSI 9.97
    rCSI 22.61%
    PRS 76.26
  • acinar cell CL0000622
    CSI 9.85
    rCSI 14.44%
    PRS 84.96
  • hematopoietic precursor cell CL0008001
    CSI 9.47
    rCSI 9.74%
    PRS 87.94
  • double negative thymocyte CL0002489
    CSI 9.08
    rCSI 6.31%
    PRS 86.34
  • respiratory suprabasal cell CL4033048
    CSI 8.64
    rCSI 11.08%
    PRS 78.62
  • pancreatic acinar cell CL0002064
    CSI 8.61
    rCSI 11.45%
    PRS 80.83
  • basal cell CL0000646
    CSI 8.4
    rCSI 11.23%
    PRS 73.81
  • colon goblet cell CL0009039
    CSI 8.11
    rCSI 19.28%
    PRS 81.71
  • forebrain radial glial cell CL0013000
    CSI 8.08
    rCSI 25.93%
    PRS 77.86
  • epithelial cell of lung CL0000082
    CSI 8
    rCSI 6.63%
    PRS 75.41
  • CD4-positive, alpha-beta memory T cell CL0000897
    CSI 7.99
    rCSI 5.73%
    PRS 88.02
  • central memory CD4-positive, alpha-beta T cell CL0000904
    CSI 7.94
    rCSI 4.69%
    PRS 90.49
  • immature B cell CL0000816
    CSI 7.69
    rCSI 5.72%
    PRS 86.66
  • CD1c-positive myeloid dendritic cell CL0002399
    CSI 7.67
    rCSI 9.27%
    PRS 83.29
  • neuroblast (sensu Vertebrata) CL0000031
    CSI 7.66
    rCSI 9.84%
    PRS 71.18
  • elicited macrophage CL0000861
    CSI 7.62
    rCSI 6.99%
    PRS 83.49
  • pancreatic D cell CL0000173
    CSI 7.41
    rCSI 7.29%
    PRS 77.61
  • hematopoietic stem cell CL0000037
    CSI 7.38
    rCSI 4.91%
    PRS 77.86
  • interneuron CL0000099
    CSI 7.34
    rCSI 14.74%
    PRS 64.39
  • conventional dendritic cell CL0000990
    CSI 7.34
    rCSI 6.12%
    PRS 78.35
  • regulatory T cell CL0000815
    CSI 7.32
    rCSI 8.48%
    PRS 78.43
  • podocyte CL0000653
    CSI 7.24
    rCSI 32.19%
    PRS 75.29
  • keratinocyte CL0000312
    CSI 7.1
    rCSI 5.95%
    PRS 78.06
  • mammary gland epithelial cell CL0002327
    CSI 7.06
    rCSI 24.76%
    PRS 84.2
  • radial glial cell CL0000681
    CSI 6.73
    rCSI 9.36%
    PRS 73.42
  • midzonal region hepatocyte CL0019028
    CSI 6.71
    rCSI 15.74%
    PRS 76.07
  • mesenchymal cell CL0008019
    CSI 6.69
    rCSI 17%
    PRS 68.4
  • CD4-positive, CD25-positive, alpha-beta regulatory T cell CL0000792
    CSI 6.66
    rCSI 6.55%
    PRS 88.9
  • neural crest cell CL0011012
    CSI 6.59
    rCSI 5.21%
    PRS 62.61
  • enteroendocrine cell CL0000164
    CSI 6.53
    rCSI 8.92%
    PRS 75.37
  • respiratory basal cell CL0002633
    CSI 6.35
    rCSI 6.58%
    PRS 79.76
  • perivascular cell CL4033054
    CSI 6.35
    rCSI 8.68%
    PRS 79.78
  • activated CD8-positive, alpha-beta T cell CL0000906
    CSI 6.31
    rCSI 6.2%
    PRS 89.78
  • bronchus fibroblast of lung CL2000093
    CSI 6.04
    rCSI 4.91%
    PRS 74.76
  • erythroblast CL0000765
    CSI 5.88
    rCSI 15.6%
    PRS 81.99
  • skin fibroblast CL0002620
    CSI 5.78
    rCSI 4.98%
    PRS 77.11
  • CD4-positive, alpha-beta thymocyte CL0000810
    CSI 5.66
    rCSI 4.54%
    PRS 90.03
  • promonocyte CL0000559
    CSI 5.5
    rCSI 9.43%
    PRS 82.21
  • intestinal crypt stem cell of colon CL0009043
    CSI 5.46
    rCSI 40.99%
    PRS 86.53
  • paneth cell CL0000510
    CSI 5.45
    rCSI 8.04%
    PRS 86.76
  • club cell CL0000158
    CSI 5.22
    rCSI 7.64%
    PRS 69.56
  • retina horizontal cell CL0000745
    CSI 5.2
    rCSI 7.92%
    PRS 71.47
  • glandular epithelial cell CL0000150
    CSI 5.15
    rCSI 13.57%
    PRS 88.56
  • glioblast CL0000030
    CSI 5.11
    rCSI 8.15%
    PRS 66.46
  • early lymphoid progenitor CL0000936
    CSI 5.09
    rCSI 4.47%
    PRS 80.17
  • tracheobronchial serous cell CL0019001
    CSI 5.06
    rCSI 21.84%
    PRS 83.67
  • epithelial cell of lower respiratory tract CL0002632
    CSI 5.01
    rCSI 3.88%
    PRS 78.25
  • lung macrophage CL1001603
    CSI 4.91
    rCSI 10.96%
    PRS 82.66
  • mucus secreting cell CL0000319
    CSI 4.9
    rCSI 7.78%
    PRS 84.18
  • peripheral nervous system neuron CL2000032
    CSI 4.8
    rCSI 6.54%
    PRS 66.2
  • effector CD8-positive, alpha-beta T cell CL0001050
    CSI 4.74
    rCSI 3.6%
    PRS 87.56
  • neuroblast (sensu Nematoda and Protostomia) CL0000338
    CSI 4.72
    rCSI 5.45%
    PRS 67
  • acinar cell of salivary gland CL0002623
    CSI 0.1
    rCSI 2.7%
    PRS 88.8%
  • respiratory goblet cell CL0002370
    CSI 0.2
    rCSI 2.3%
    PRS 84.9%
  • P/D1 enteroendocrine cell CL0002268
    CSI 0.3
    rCSI 1.6%
    PRS 84.7%
  • megakaryocyte progenitor cell CL0000553
    CSI 0.3
    rCSI 5.8%
    PRS 93.5%
  • Cajal-Retzius cell CL0000695
    CSI 0.3
    rCSI 2.7%
    PRS 81.9%
  • pluripotent stem cell CL0002248
    CSI 0.4
    rCSI 12.3%
    PRS 87.9%
  • bronchiolar smooth muscle cell CL4033017
    CSI 0.6
    rCSI 9.1%
    PRS 85.6%
  • L6b glutamatergic cortical neuron CL4023038
    CSI 0.7
    rCSI 2.2%
    PRS 58.0%
  • mesenchymal stem cell CL0000134
    CSI 0.7
    rCSI 8.0%
    PRS 82.5%
  • CD8-alpha-alpha-positive, alpha-beta intraepithelial T cell CL0000915
    CSI 0.8
    rCSI 3.4%
    PRS 93.0%
  • kidney connecting tubule epithelial cell CL1000768
    CSI 0.8
    rCSI 2.0%
    PRS 64.8%
  • stromal cell CL0000499
    CSI 0.8
    rCSI 2.3%
    PRS 70.2%
  • basophil mast progenitor cell CL0002028
    CSI 0.9
    rCSI 4.6%
    PRS 94.4%
  • erythroid lineage cell CL0000764
    CSI 0.9
    rCSI 5.7%
    PRS 86.2%
  • type B pancreatic cell CL0000169
    CSI 0.9
    rCSI 2.0%
    PRS 73.9%
  • stromal cell of ovary CL0002132
    CSI 0.9
    rCSI 2.4%
    PRS 83.4%
  • CD8-positive, CD28-negative, alpha-beta regulatory T cell CL0000920
    CSI 1.0
    rCSI 2.1%
    PRS 88.2%
  • eosinophil CL0000771
    CSI 1.2
    rCSI 7.5%
    PRS 92.8%
  • enteroendocrine cell of small intestine CL0009006
    CSI 1.2
    rCSI 2.5%
    PRS 84.3%
  • small intestine goblet cell CL1000495
    CSI 1.2
    rCSI 2.5%
    PRS 81.1%
  • basal cell of epithelium of trachea CL1000348
    CSI 1.2
    rCSI 8.3%
    PRS 82.6%
  • kidney loop of Henle thin ascending limb epithelial cell CL1001107
    CSI 1.2
    rCSI 3.0%
    PRS 70.0%
  • intraepithelial lymphocyte CL0002496
    CSI 1.2
    rCSI 3.3%
    PRS 93.9%
  • pancreatic PP cell CL0002275
    CSI 1.3
    rCSI 5.0%
    PRS 83.8%
  • tracheal goblet cell CL1000329
    CSI 1.3
    rCSI 2.8%
    PRS 83.5%
  • retinal cone cell CL0000573
    CSI 1.3
    rCSI 2.1%
    PRS 64.4%
  • group 2 innate lymphoid cell CL0001069
    CSI 1.3
    rCSI 7.2%
    PRS 94.0%
  • epithelial cell of esophagus CL0002252
    CSI 1.4
    rCSI 13.5%
    PRS 83.4%
  • pre-conventional dendritic cell CL0002010
    CSI 1.4
    rCSI 18.7%
    PRS 93.2%
  • respiratory epithelial cell CL0002368
    CSI 1.5
    rCSI 9.0%
    PRS 93.5%
  • intestinal tuft cell CL0019032
    CSI 1.5
    rCSI 2.3%
    PRS 79.1%
  • luminal epithelial cell of mammary gland CL0002326
    CSI 1.5
    rCSI 2.7%
    PRS 86.4%
  • follicular dendritic cell CL0000442
    CSI 1.6
    rCSI 25.0%
    PRS 87.1%
  • common lymphoid progenitor CL0000051
    CSI 1.6
    rCSI 2.1%
    PRS 90.7%
  • retinal blood vessel endothelial cell CL0002585
    CSI 1.6
    rCSI 2.5%
    PRS 78.7%
  • parietal epithelial cell CL1000452
    CSI 1.6
    rCSI 4.2%
    PRS 65.9%
  • caudal ganglionic eminence derived cortical interneuron CL4023064
    CSI 1.6
    rCSI 2.8%
    PRS 55.4%
  • mature B cell CL0000785
    CSI 1.6
    rCSI 1.4%
    PRS 84.8%
  • Langerhans cell CL0000453
    CSI 1.6
    rCSI 2.5%
    PRS 87.5%
  • type EC enteroendocrine cell CL0000577
    CSI 1.6
    rCSI 5.8%
    PRS 80.6%
  • effector memory CD8-positive, alpha-beta T cell CL0000913
    CSI 1.6
    rCSI 1.5%
    PRS 87.6%
  • pancreatic epsilon cell CL0005019
    CSI 1.7
    rCSI 7.9%
    PRS 85.9%
  • tracheobronchial smooth muscle cell CL0019019
    CSI 1.7
    rCSI 3.0%
    PRS 81.2%
  • mature alpha-beta T cell CL0000791
    CSI 1.7
    rCSI 6.2%
    PRS 90.9%
  • class switched memory B cell CL0000972
    CSI 1.8
    rCSI 1.3%
    PRS 88.2%
  • CD8-positive, alpha-beta cytotoxic T cell CL0000794
    CSI 1.8
    rCSI 2.1%
    PRS 90.6%
  • erythroid progenitor cell CL0000038
    CSI 1.8
    rCSI 10.3%
    PRS 81.4%
  • primitive red blood cell CL0002355
    CSI 1.9
    rCSI 10.0%
    PRS 82.7%
  • T-helper 17 cell CL0000899
    CSI 1.9
    rCSI 1.5%
    PRS 92.3%
  • sst GABAergic cortical interneuron CL4023017
    CSI 1.9
    rCSI 2.5%
    PRS 57.5%
  • Schwann cell CL0002573
    CSI 2.0
    rCSI 5.6%
    PRS 71.2%
  • vascular associated smooth muscle cell CL0000359
    CSI 2.0
    rCSI 6.3%
    PRS 73.4%
  • microcirculation associated smooth muscle cell CL0008035
    CSI 2.0
    rCSI 5.7%
    PRS 75.1%
  • BEST4+ enteroycte CL4030026
    CSI 2.0
    rCSI 2.4%
    PRS 76.3%
  • effector memory CD4-positive, alpha-beta T cell CL0000905
    CSI 2.1
    rCSI 2.9%
    PRS 93.0%
  • conjunctival epithelial cell CL1000432
    CSI 2.3
    rCSI 3.6%
    PRS 75.2%
  • intrahepatic cholangiocyte CL0002538
    CSI 2.4
    rCSI 5.6%
    PRS 80.7%
  • ON-bipolar cell CL0000749
    CSI 2.4
    rCSI 3.6%
    PRS 75.3%
  • lung secretory cell CL1000272
    CSI 2.4
    rCSI 6.0%
    PRS 74.1%
  • epithelial cell of proximal tubule segment 3 CL4030011
    CSI 2.4
    rCSI 19.2%
    PRS 75.1%
  • pulmonary ionocyte CL0017000
    CSI 2.4
    rCSI 3.0%
    PRS 81.9%
  • bronchial goblet cell CL1000312
    CSI 2.5
    rCSI 9.8%
    PRS 84.9%
  • enterocyte of epithelium of large intestine CL0002071
    CSI 2.5
    rCSI 13.0%
    PRS 81.9%
  • type L enteroendocrine cell CL0002279
    CSI 2.5
    rCSI 4.7%
    PRS 84.4%
  • germinal center B cell CL0000844
    CSI 2.5
    rCSI 7.5%
    PRS 86.6%
  • mesodermal cell CL0000222
    CSI 2.6
    rCSI 3.1%
    PRS 73.0%
  • ionocyte CL0005006
    CSI 2.7
    rCSI 2.9%
    PRS 75.6%
  • retinal pigment epithelial cell CL0002586
    CSI 2.8
    rCSI 5.5%
    PRS 71.0%
  • dendritic cell, human CL0001056
    CSI 2.8
    rCSI 4.3%
    PRS 84.0%
  • neural progenitor cell CL0011020
    CSI 2.8
    rCSI 12.3%
    PRS 63.4%
  • natural T-regulatory cell CL0000903
    CSI 2.9
    rCSI 5.4%
    PRS 95.0%
  • myeloid lineage restricted progenitor cell CL0000839
    CSI 2.9
    rCSI 15.1%
    PRS 91.1%
  • hematopoietic multipotent progenitor cell CL0000837
    CSI 3.0
    rCSI 7.1%
    PRS 89.0%
  • Hofbauer cell CL3000001
    CSI 3.0
    rCSI 5.6%
    PRS 84.0%
  • thymocyte CL0000893
    CSI 3.0
    rCSI 10.7%
    PRS 94.6%
  • intermediate monocyte CL0002393
    CSI 3.1
    rCSI 4.7%
    PRS 80.3%
  • Kupffer cell CL0000091
    CSI 3.1
    rCSI 7.2%
    PRS 75.6%
  • kidney epithelial cell CL0002518
    CSI 3.2
    rCSI 6.0%
    PRS 89.7%
  • myeloid dendritic cell CL0000782
    CSI 3.4
    rCSI 4.9%
    PRS 88.3%
  • paneth cell of colon CL0009009
    CSI 3.5
    rCSI 34.6%
    PRS 86.2%
  • squamous epithelial cell CL0000076
    CSI 3.6
    rCSI 8.4%
    PRS 76.3%
  • enterocyte of epithelium of small intestine CL1000334
    CSI 3.6
    rCSI 54.9%
    PRS 85.3%
  • IgG plasma cell CL0000985
    CSI 3.7
    rCSI 4.4%
    PRS 87.1%
  • choroid plexus epithelial cell CL0000706
    CSI 3.7
    rCSI 6.1%
    PRS 64.0%
  • enteroendocrine cell of colon CL0009042
    CSI 3.7
    rCSI 17.5%
    PRS 86.0%
  • kidney distal convoluted tubule epithelial cell CL1000849
    CSI 3.7
    rCSI 39.6%
    PRS 71.5%
  • paneth cell of epithelium of small intestine CL1000343
    CSI 3.8
    rCSI 10.5%
    PRS 83.2%
  • centrilobular region hepatocyte CL0019029
    CSI 3.8
    rCSI 9.8%
    PRS 74.7%
  • peptic cell CL0000155
    CSI 3.8
    rCSI 37.2%
    PRS 87.2%
  • common dendritic progenitor CL0001029
    CSI 3.8
    rCSI 4.7%
    PRS 84.3%
  • unswitched memory B cell CL0000970
    CSI 3.8
    rCSI 3.2%
    PRS 88.7%
  • renal alpha-intercalated cell CL0005011
    CSI 3.8
    rCSI 5.1%
    PRS 82.2%
  • hepatocyte CL0000182
    CSI 3.9
    rCSI 7.0%
    PRS 74.2%
  • CD14-positive, CD16-positive monocyte CL0002397
    CSI 4.2
    rCSI 5.4%
    PRS 86.7%
  • pancreatic stellate cell CL0002410
    CSI 4.2
    rCSI 24.6%
    PRS 80.4%
  • serous secreting cell CL0000313
    CSI 4.2
    rCSI 21.4%
    PRS 91.1%
  • rod bipolar cell CL0000751
    CSI 4.3
    rCSI 7.7%
    PRS 68.0%
  • interstitial cell of Cajal CL0002088
    CSI 4.3
    rCSI 5.5%
    PRS 80.4%
  • enteric smooth muscle cell CL0002504
    CSI 4.4
    rCSI 6.2%
    PRS 76.3%
  • periportal region hepatocyte CL0019026
    CSI 4.5
    rCSI 17.5%
    PRS 75.8%

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Network Configuration

Explore relationships of the current gene. Select an Interaction Source: 'ONTOLOGY' for shared pathways (GO/Reactome) or 'STRING' for protein-protein interactions. Further refine by selecting context genes and comparing Cell Significance Index (CSI) scores between baseline and target cell types and their specific contexts.

Comma-separated if multiple.
Comma-separated if multiple.

Legend:
  • Query Gene
  • Node Color (Target Cell CSI, relative to current network):
    • Very High
    • High
    • Medium
    • Low
    • Very Low
    • CSI N/A
  • Node Size: Proportional to Target Cell CSI magnitude
  • STRING PPI Edge
  • Shared Pathway Edge (ONTOLOGY)

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Other Information

This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.

## Summary [DNPH1](/details-gene/10591), or 2'-deoxynucleoside 5'-phosphate N-hydrolase 1, is a protein-coding gene located on chromosome 6p21.1. It encodes a cytosolic enzyme that functions as a deoxyribonucleoside 5'-monophosphate N-glycosidase. This enzyme plays a crucial role in nucleotide metabolism, specifically in the deoxyribonucleoside monophosphate catabolic process ([GO:0009159](https://www.ebi.ac.uk/QuickGO/term/GO:0009159)) and nucleoside salvage pathways ([GO:0043174](https://www.ebi.ac.uk/QuickGO/term/GO:0043174)). Consistent with its role in managing nucleotide pools for cell division and growth, [DNPH1](/details-gene/10591) shows significant expression in cell types characterized by high proliferation and metabolic activity, such as various epithelial cells and progenitor cells. Early research identified it as a putative c-Myc responsive gene involved in growth regulation ([Link](https://doi.org/10.1128/mcb.17.9.4967)), suggesting a link to cell cycle control and oncogenesis. ## Cellular Roles and Expression Landscape The expression profile of [DNPH1](/details-gene/10591) highlights its fundamental role in tissues with rapid cellular turnover and specialized secretory functions. **Overall**, the gene exhibits its highest significance in epithelial lineages. It is a top marker for [ciliated epithelial cell](/details-cell/CL0000067) (CSI: 63.70) and [multi-ciliated epithelial cell](/details-cell/CL0005012) (CSI: 46.47), including those in the lung ([lung ciliated cell](/details-cell/CL1000271), CSI: 36.75). Its prominence extends to the gastrointestinal tract, with high CSI values in [intestinal epithelial cell](/details-cell/CL0002563) (CSI: 55.04), [transit amplifying cell of colon](/details-cell/CL0009011) (CSI: 46.18), [enterocyte](/details-cell/CL0000584) (CSI: 32.25), and [colonocyte](/details-cell/CL1000347) (CSI: 32.00). Furthermore, [DNPH1](/details-gene/10591)'s expression is significant in progenitor and stem cell populations, including [stem cell](/details-cell/CL0000034) (CSI: 51.77) and [megakaryocyte-erythroid progenitor cell](/details-cell/CL0000050) (CSI: 37.02). This pattern underscores its involvement in processes requiring robust nucleotide supply for DNA synthesis and cell division. Its high expression in these diverse, actively dividing cell populations is consistent with its documented role in the positive regulation of cell growth ([GO:0030307](https://www.ebi.ac.uk/QuickGO/term/GO:0030307)). ## Pathways and Molecular Function [DNPH1](/details-gene/10591) is a key enzyme in nucleotide homeostasis. Its primary molecular function is deoxyribonucleoside 5'-monophosphate n-glycosidase activity ([GO:0070694](https://www.ebi.ac.uk/QuickGO/term/GO:0070694)), which is integral to the Reactome pathway of [Nucleotide catabolism](/details-pathway/R-HSA-8956319) ([R-HSA-8956319](https://reactome.org/content/detail/R-HSA-8956319)). By catabolizing deoxynucleoside monophosphates, it participates in both the degradation and recycling (salvage) of nucleotides, which is critical for maintaining the appropriate balance of dNTPs for DNA replication and repair. This metabolic role is essential in the highly proliferative cells where its expression is most prominent, such as the epithelial lining of the intestine and progenitor cells. The protein is known to form homodimers ([GO:0042803](https://www.ebi.ac.uk/QuickGO/term/GO:0042803)) and resides primarily in the [cytoplasm](/details-component/GO0005737) ([GO:0005737](https://www.ebi.ac.uk/QuickGO/term/GO:0005737)) and [cytosol](/details-component/GO0005829) ([GO:0005829](https://www.ebi.ac.uk/QuickGO/term/GO:0005829)). Its identification as a target of the ETV1/ER81 transcription factor and its upregulation in breast tumors further links its metabolic function to oncogenic signaling pathways ([Link](https://doi.org/10.1002/jcb.21884)). ## Research Directions The established role of [DNPH1](/details-gene/10591) in nucleotide metabolism and its strong association with proliferating epithelial cells and progenitor populations suggest its dysregulation could be a key factor in cancer development and progression. Its connection to oncogenic drivers like c-Myc and ETV1/ER81 provides a direct mechanistic link between transcriptional reprogramming and the metabolic adaptations required for tumorigenesis. Based on the available data, several testable hypotheses can be proposed: 1. **Hypothesis 1:** In colorectal cancer, overexpression of [DNPH1](/details-gene/10591) is a critical metabolic adaptation driven by oncogenic signaling (e.g., Wnt/beta-catenin or MYC amplification) that sustains the high proliferative rate of tumor cells by enhancing the nucleotide salvage pathway. 2. **Hypothesis 2:** [DNPH1](/details-gene/10591) activity is essential for the regenerative capacity of epithelial tissues, and its genetic ablation would impair tissue repair following injury, for example, in the intestinal epithelium after colitis induction. A compelling experiment to test the first hypothesis would be to use CRISPR-Cas9 to knock out [DNPH1](/details-gene/10591) in established colorectal cancer cell lines and in patient-derived intestinal organoid models. The impact on cell proliferation rates could be measured via EdU incorporation assays. Furthermore, metabolic flux analysis using isotopic labeling (e.g., with ¹³C-labeled glucose or nucleosides) could directly quantify changes in nucleotide salvage versus de novo synthesis pathways upon [DNPH1](/details-gene/10591) loss. This would directly assess the dependency of cancer cells on this specific metabolic enzyme. Given its enzymatic nature and role in supporting cell proliferation, [DNPH1](/details-gene/10591) represents a potential therapeutic target. Inhibition, rather than activation, would be the desired therapeutic strategy to block a key metabolic pathway fueling cancer growth. The existence of known N(6)-substituted AMP inhibitors provides a strong starting point for drug development ([Link](https://doi.org/10.1371/journal.pone.0080755)). However, a significant challenge will be achieving tumor specificity, as the enzyme is also highly active in healthy, high-turnover tissues. A therapeutic window might exist in cancers that are exceptionally dependent on this pathway due to specific oncogenic drivers, suggesting that patient stratification based on the genetic background of the tumor (e.g., MYC amplification) could be critical for successful clinical application.

Genular Protein ID: 1670526254

Symbol: DNPH1_HUMAN

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 9271375

Title: Identification of putative c-Myc-responsive genes: characterization of rcl, a novel growth-related gene.

PubMed ID: 9271375

DOI: 10.1128/mcb.17.9.4967

PubMed ID: 18726892

Title: Rcl is a novel ETV1/ER81 target gene upregulated in breast tumors.

PubMed ID: 18726892

DOI: 10.1002/jcb.21884

PubMed ID: 14574404

Title: The DNA sequence and analysis of human chromosome 6.

PubMed ID: 14574404

DOI: 10.1038/nature02055

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 17081983

Title: Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.

PubMed ID: 17081983

DOI: 10.1016/j.cell.2006.09.026

PubMed ID: 18669648

Title: A quantitative atlas of mitotic phosphorylation.

PubMed ID: 18669648

DOI: 10.1073/pnas.0805139105

PubMed ID: 19413330

Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.

PubMed ID: 19413330

DOI: 10.1021/ac9004309

PubMed ID: 19690332

Title: Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.

PubMed ID: 19690332

DOI: 10.1126/scisignal.2000007

PubMed ID: 20068231

Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.

PubMed ID: 20068231

DOI: 10.1126/scisignal.2000475

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 21406692

Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.

PubMed ID: 21406692

DOI: 10.1126/scisignal.2001570

PubMed ID: 22223895

Title: Comparative large-scale characterisation of plant vs. mammal proteins reveals similar and idiosyncratic N-alpha acetylation features.

PubMed ID: 22223895

DOI: 10.1074/mcp.m111.015131

PubMed ID: 22814378

Title: N-terminal acetylome analyses and functional insights of the N-terminal acetyltransferase NatB.

PubMed ID: 22814378

DOI: 10.1073/pnas.1210303109

PubMed ID: 23186163

Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.

PubMed ID: 23186163

DOI: 10.1021/pr300630k

PubMed ID: 24260472

Title: N (6)-substituted AMPs inhibit mammalian deoxynucleotide N-hydrolase DNPH1.

PubMed ID: 24260472

DOI: 10.1371/journal.pone.0080755

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

PubMed ID: 25944712

Title: N-terminome analysis of the human mitochondrial proteome.

PubMed ID: 25944712

DOI: 10.1002/pmic.201400617

PubMed ID: 33833118

Title: Targeting the nucleotide salvage factor DNPH1 sensitizes BRCA-deficient cells to PARP inhibitors.

PubMed ID: 33833118

DOI: 10.1126/science.abb4542

PubMed ID: 37142196

Title: An enzyme-coupled microplate assay for activity and inhibition of hmdUMP hydrolysis by DNPH1.

PubMed ID: 37142196

DOI: 10.1016/j.ab.2023.115171

PubMed ID: 25108359

Title: 6-(Hetero)Arylpurine nucleotides as inhibitors of the oncogenic target DNPH1: Synthesis, structural studies and cytotoxic activities.

PubMed ID: 25108359

DOI: 10.1016/j.ejmech.2014.07.110

Sequence Information:

  • Length: 174
  • Mass: 19108
  • Checksum: C148641A60F383A3
  • Sequence:
  • MAAAMVPGRS ESWERGEPGR PALYFCGSIR GGREDRTLYE RIVSRLRRFG TVLTEHVAAA 
    ELGARGEEAA GGDRLIHEQD LEWLQQADVV VAEVTQPSLG VGYELGRAVA FNKRILCLFR 
    PQSGRVLSAM IRGAADGSRF QVWDYEEGEV EALLDRYFEA DPPGQVAASP DPTT